| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1915 |
|---|
| Symbol | |
|---|
| ID | 7382276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2047956 |
|---|
| End bp | 2049593 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643655232 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002553372 |
|---|
| Protein GI | 222111108 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCTG CGCCCCCCCT GTCTCCCTCG TCCGCGCCGC TGCTGCAGGT GCGGGACCTG
CGGGTGCGCT TCGGCGCCAA GCAGGTGGTG CATGGGGTGA GCTTCGACAT GGCCCCTGGC
GAAAAGCTCG CGCTGGTGGG TGAATCCGGC TCGGGCAAAA CAGTGACTGC GCTGGCGCTG
CTGCGCCTGA CGGGCGATGC GCAACTGGAG GGGAGCGCGC TGATGCACGG GCGCGACCTG
CTCCAACTGC CTGAGCGCGA ACTGCGCGGC GTGCGCGGCG GCGACATCGC CATGGTGTTC
CAGGAACCCA TGACGGCGTT GAACCCGCTG ATGACGATTG GCGACCAGGT GGCCGAGGTC
TTGGTGCTAA AACAGGCCCT GAGCAAGGCG CAGAGCGCGC AAGCAGCTAT CGAACTGCTA
GCGAGTACCG GCATCCCCGA GCCGGCGCGG CGCGCGGGCA GTTTTCCGCA CCAGCTTTCG
GGCGGGCAGC GCCAGCGCGC CATGATCGCC ATGGCCCTGG CCAGTCGACC GAAGCTGTTG
TTGGCCGACG AGCCCACCAC CGCGCTGGAC GTGACGCTGC GCGGCCAGAT CCTGGACCTG
CTGTCCGACC TGCAGCGCCA GACGGGCATG GCCGTGCTGC TCATCACGCA CGACCTGCTG
CTGGTGCGCC GCTTTGCCGA TCGCGTGGCC GTCATGGAGC AGGGCGCCGT GGTGGAGCAG
GGCACCGTCG CCCAGGTGTT CGACGCACCG CAGCATGCCT ACACGCGCAA GCTGATCGGC
AGTACGCCGC GGCGGGACGT GGTGGAAGGC GGTGCCGACG GCGACGCCGT GCCCGCCGCG
CAGGCAAGCG GCCTGCGCGT GGCCTACCCC GTGCCGGTGC CGGGCATCCG CGGCTGGTTT
GCCAAAGGTG AATTCGTGGC CGTGAAGGAT GCGGGCTTTC GCATTGCGCG TGCGCGCACA
CTGGGGGTCG TGGGCGAATC GGGCTCGGGC AAGTCCACGC TGGCCCAGGC GCTGCTGGGC
CTGCTGCCGT CGCGCGGTGA CCTGCAGGTG GCCGGCCAGG CCTGGCAGCA GCCCGCCCAC
CGCAACACCG CGCACAACCA GCAGCTGCGC CGGCAGGTGC AGGTGGTGTT CCAGGACCCG
TTCTCATCCC TGTCGCCGCG CATGACCGTG GAGGAGATCG TGGGCGAGGG CCTGCGCGTG
CACATGCCTG CGCTGGACGT GGCCGAGCGC CGCACGCGCG TGGCCGCCAT GCTGGCCGAG
GTGGGCCTGA CGGACGCGCA ATTCCCGGGC CTGCTGGCGC GCTACCCGCA TGAGTTCTCG
GGCGGCCAGC GCCAGCGCCT GGCCATTGCG CGCGCGCTCA TCGTCGAGCC GCAGGTGCTG
GTGCTGGACG AGCCCACCAG CGCGCTGGAC GTCACCATTC AGCAGCAGGT GCTGAGCCTG
CTGCAGCGCC TGCAGAAGGA GCGGGCGCTG TCGTACCTGC TCATCACGCA CGACGTGGCG
GTGGTGCGCG CCATGGCGCA TGAGGTCATC GTCATGAAGG ACGGCGAGGT GGTGGAAAGC
GGCAGCGTGC ACCAGGTGCT GGATGCGCCG CGCCACGCCT ACACGCAACG GCTGGTGCAG
GCCGCGCAGC CGGTCTGA
|
|---|
| Protein sequence | MRAAPPLSPS SAPLLQVRDL RVRFGAKQVV HGVSFDMAPG EKLALVGESG SGKTVTALAL
LRLTGDAQLE GSALMHGRDL LQLPERELRG VRGGDIAMVF QEPMTALNPL MTIGDQVAEV
LVLKQALSKA QSAQAAIELL ASTGIPEPAR RAGSFPHQLS GGQRQRAMIA MALASRPKLL
LADEPTTALD VTLRGQILDL LSDLQRQTGM AVLLITHDLL LVRRFADRVA VMEQGAVVEQ
GTVAQVFDAP QHAYTRKLIG STPRRDVVEG GADGDAVPAA QASGLRVAYP VPVPGIRGWF
AKGEFVAVKD AGFRIARART LGVVGESGSG KSTLAQALLG LLPSRGDLQV AGQAWQQPAH
RNTAHNQQLR RQVQVVFQDP FSSLSPRMTV EEIVGEGLRV HMPALDVAER RTRVAAMLAE
VGLTDAQFPG LLARYPHEFS GGQRQRLAIA RALIVEPQVL VLDEPTSALD VTIQQQVLSL
LQRLQKERAL SYLLITHDVA VVRAMAHEVI VMKDGEVVES GSVHQVLDAP RHAYTQRLVQ
AAQPV
|
|---|
| |