| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1908 |
|---|
| Symbol | |
|---|
| ID | 7382269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2040637 |
|---|
| End bp | 2041623 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643655225 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002553365 |
|---|
| Protein GI | 222111101 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.865584 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGT TCCCGCATCG CCGCCGTGTA CTGGCTGCCA CCGCTGCGGC CGTCCTGTGT
GCCGCGGCCG GCACCGCCAA CGCACAGGCC CCCGCCTATC CTGCCAAGCC CGTCACTTTC
GTCGTGCCGT TTGCGGCCGG CAGTGCCACC GACCAGCTGG CGCGGGCATT GGGCCAGGCC
GTGAGCACCG ATGCGCGGCA ACCCGTGGTC GTGGAGAACA AGGCCGGCGC CAGCGGCATG
ATCGCCGCGC AGTCCGTCGC CAAGGCACCG GCAGATGGGT ACACGGTGCT CATCACCACC
AACACCACGC ATGCCGCGAA CGAACACCTG TACAAGAAAC TGCCCTACGA CCCAGTGAAG
GATTTCGCTC CCGTCACCGG CCTGGGTAAG GGCGGCCAGG TGCTGGTGGT GAACGCGGGC
GCTCCCTACA AGAACGTGGG CGACCTGCTG GCCGCCGCCC GCAAGAACCC CGGCAAGCTG
AGCTTTGGCA GCGGCAGTTC TTCCAGCCGC ATGGCCGGCG AGATGCTCAA GCAACTGGCG
GGGGTGGATA TCCTGCATGT GCCGTACAAG AGCAACCCGT TGGCCATCAC CGATCTGCTC
GGCGGGCAGA TCGACCTGAT GATCACCGAC ACGTCCACCG GCGTTCCTCA GGTCAAGGCG
GGCAAGCTGC GCGCGCTGGG GTACTCCACG CAAAAGCGCA GCACGCAGCT GCCCGAGGTG
CCCACGCTGG ATGAGGCCGG TGTGAAGGGC TATGACATGG GCTACTGGTT TGCGGCCTAC
GTGCCCGCCG GCACGCCCGC GCCCGTGGTG GCGCGGCTGA ACGCGCTGCT GGCGCAGGCG
ACGAGGAGCC AGGCCGCTCA GTCGTTCTTC GAGACCGCAG GCTCCGAGGC CTGGACCACC
ACGCCCGAAG AGCTGGCGCG CTTTCAGGCC GCCGAGACCC AGAAGTGGGG CAGGGTGATC
AAGGCCGCCG GTATTGAGGC GGAATGA
|
|---|
| Protein sequence | MNPFPHRRRV LAATAAAVLC AAAGTANAQA PAYPAKPVTF VVPFAAGSAT DQLARALGQA
VSTDARQPVV VENKAGASGM IAAQSVAKAP ADGYTVLITT NTTHAANEHL YKKLPYDPVK
DFAPVTGLGK GGQVLVVNAG APYKNVGDLL AAARKNPGKL SFGSGSSSSR MAGEMLKQLA
GVDILHVPYK SNPLAITDLL GGQIDLMITD TSTGVPQVKA GKLRALGYST QKRSTQLPEV
PTLDEAGVKG YDMGYWFAAY VPAGTPAPVV ARLNALLAQA TRSQAAQSFF ETAGSEAWTT
TPEELARFQA AETQKWGRVI KAAGIEAE
|
|---|
| |