Gene Dtpsy_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1906 
SymbolsucA 
ID7382267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp2036417 
End bp2039293 
Gene Length2877 bp 
Protein Length958 aa 
Translation table11 
GC content64% 
IMG OID643655223 
Product2-oxoglutarate dehydrogenase E1 component 
Protein accessionYP_002553363 
Protein GI222111099 
COG category[C] Energy production and conversion 
COG ID[COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes 
TIGRFAM ID[TIGR00239] 2-oxoglutarate dehydrogenase, E1 component 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.186232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATC CGACATCCGT CTACCAAGCC TACCAAGGCA ACACCTATCT TTTCGGCGGC 
AACGCGCCCT ACGTCGAAGA GATGTATGAG AACTACCTTG CCAACCCTGG CAGCGTGCCA
GACTCCTGGC GCGAATACTT TGACGCACTG CAACATGTGC CCGCGGTAGA CGGCAGCAAT
GCCAAGGATG TTCCCCACCT GCCCGTTATC AACGCCTTTG CCGAGCGTGC CAAGGCCGGC
GGCACCAAGG TCGTGGTGGC CAGCGCCGAC GCCGAGATGG GCCGCAAGCG CACCGCCGTC
CAGCAACTGA TCGCCGCGTA CCGCAACGTG GGCCAGCGCT GGGCCGACCT GGACCCCCTC
AAGCGCACCG AGCGCCCCCA AATTCCCGAA CTGGAGCCGT CGTTCTACGG CTTCAGCGAT
GCCGACCAGG AAACGGTGTT CGACGCGAGC AACACCTTCT TCGGCAAGGA CAAGATGCCT
CTGCGCGAGC TGCTGAACGC GCTGCGCGAG ACCTACTGCG GCACCATCGG CGTGGAGTAC
ATGTACGCCA CCGACCAGGT GCAAAAGCGC TGGTGGCAGC AAAAGCTGGA AAGCATCCGC
AGCAAGCCCA ACTTCTCTGC CGACAAGAAA AAGCGCATCC TGGAGCGCCT GACGGCCGCC
GAAGGCCTGG AACGCTACCT GCACACCAAG TACGTGGGCC AGAAGCGCTT CTCGCTCGAG
GGGGGCGAGT CCTTCATCGC CGCCATGGAC GAGTTGATCA ACTCCGCAGG CGCGAAGGGC
GTGCAGGAAG TGGTGATCGG CATGGCCCAC CGCGGCCGCC TGAACGTTCT GGTCAACACC
CTGGGCAAGA TGCCCAAGGA CCTGTTCGCC GAGTTCGACC ACACCGCCCC CGAGGACCTG
CCCGCCGGTG ACGTGAAATA CCACCAGGGC TTCAGCTCCG ACGTCTCCAC GGCCGGCGGC
CCGGTGCACC TGTCGCTCGC GTTCAACCCC TCGCACCTGG AAATCGTCAA CCCGGTGGTC
GAGGGCTCCG TGCGCTCGCG CATGGACCGC CGCGGCGACC CCAAGGGGAA ACAGGTGCTG
CCCGTGCTGG TGCACGGTGA CGCGGCCTTT GCCGGCCAGG GCGTGAATCA GGAAACCCTG
GCCCTGTCCG AAACCCGTGG CTACACCACG GGCGGTACGG TGCACCTGAT CATCAACAAC
CAGATCGGCT TCACCACGTC CGATCCGCGC GACCTGCGCT CTACGCTGTA CTGCACCGAC
ATCGTGAAGA TGATCGAGTC GCCCGTGCTG CACGTGAACG GTGACGATCC CGAGGCCGTG
TGCCTGGCCA TGCAGCTGGC GCTGGATTTC CGCATGGAAT TCGCCAAGGA CGTGGTGGTG
GACATCATCT GCTACCGCAA GCTGGGCCAC AACGAGCAGG ACACGCCGGC GCTGACCCAG
CCGCTGATGT ACAAGAAGAT CGGTCAACAC CCCGGCACGC GCAAGCTCTA CGCCGACAAG
CTGGCAGCCC AGGGTCTGGG CGAGACGCTG GGCGACGACA TGGCCAAGGC CTATCGCGCC
GCCATGGACG AGGGCAAGCA CACGGTCGAT CCGGTGCTGA CCAACTTCAA GAGCAAGTAC
GCCGTGGACT GGAGCCCCTT CCTGGACCAG AAGTGGACCG ATGCCGGCGA CACCGCCATC
CCGCTGGCCG AGTGGAAGCG CATCGCCGAG AAGATCACGA CCATTCCAGA GACCGTCGCA
CCGCACCAAC TGGTGAAGAA GGTCTACGAC GACCGCGCCG CCATGGGCCG TGGCGAGGTC
AACGTGGATT GGGGCATGGG CGAGCACATG GCCTTCGCAT CGCTGGTGGC ATCGGGCTAT
CCCGTGCGCC TGTCTGGCGA GGATTGCGGC CGCGGTACGT TCACGCACCG CCACGCCGTG
ATTCACGACC AAAAGCGTGA GAAGTGGGAC GAAGGCACCT ACATCCCGCT GCAGAACGTG
GCCGAGAACC AGGCGCCGTT CACGGTGATC GACTCCATCC TGTCCGAGGA GGCCGTTCTG
GCCTTCGAGT ACGGCTACGC CTCCAACGAC CCCAACACGC TGGTGGTCTG GGAAGCGCAG
TTTGGCGACT TCGCCAACGG CGCACAGGTG GTGATCGACC AGTTCATCGC ATCGGGCGAA
GTGAAGTGGG GCCGCGTGAA CGGCATCACG CTGATGCTGC CGCACGGCTA CGAAGGCCAG
GGCCCAGAGC ACAGCTCGGC CCGCCTGGAG CGCTTCATGC AGCTGGCCGC TGACACCAAC
ATGCAGATCG TGCAGCCCAC CACGGCGAGC CAGATCTTCC ATGTGCTGCG CCGCCAGATG
GTGCGCAACC TGCGCAAGCC CCTGGTCATC ATGACGCCGA AGTCGCTGCT GCGTAACAAG
GACGCCACGT CGCCGCTGTC CGAGTTCACC AAGGGCGGTT TCCAGACCGT CATCTCGGAG
CAGGACGAAG CGATCGCCAA GAAGGCCGAC AAGGTCAAGC GCGTGATCGC CTGCTCGGGC
AAGGTCTACT ACGACCTCGT GAAGAAGCGC GTGGAGAAGG ACGCTACCGA CGTGGCCATC
ATCCGCGTCG AGCAGCTCTA CCCGTTCCCG CACAAGGCCT TTGCCGCCGA GCTCAAGAAG
TACCCGAATG CCACCGACAT CGTGTGGTGC CAGGACGAAC CGCAGAACCA GGGCGCCTGG
TTCTTCATCC AGCACAACAT CCACGAGAAC ATGCTCGATG GCCAGAAGCT GGGCTATGCC
GGCCGCGCCG CATCTGCCTC CCCCGCAGTG GGTTACGCTC ACCTGCACCA GGAGCAGCAA
AAGGCCTTGG TGGAAGCCGC TTTCGCCAAG CTCAAGGGTT TTGTCCTGAC CAAGTAA
 
Protein sequence
MSDPTSVYQA YQGNTYLFGG NAPYVEEMYE NYLANPGSVP DSWREYFDAL QHVPAVDGSN 
AKDVPHLPVI NAFAERAKAG GTKVVVASAD AEMGRKRTAV QQLIAAYRNV GQRWADLDPL
KRTERPQIPE LEPSFYGFSD ADQETVFDAS NTFFGKDKMP LRELLNALRE TYCGTIGVEY
MYATDQVQKR WWQQKLESIR SKPNFSADKK KRILERLTAA EGLERYLHTK YVGQKRFSLE
GGESFIAAMD ELINSAGAKG VQEVVIGMAH RGRLNVLVNT LGKMPKDLFA EFDHTAPEDL
PAGDVKYHQG FSSDVSTAGG PVHLSLAFNP SHLEIVNPVV EGSVRSRMDR RGDPKGKQVL
PVLVHGDAAF AGQGVNQETL ALSETRGYTT GGTVHLIINN QIGFTTSDPR DLRSTLYCTD
IVKMIESPVL HVNGDDPEAV CLAMQLALDF RMEFAKDVVV DIICYRKLGH NEQDTPALTQ
PLMYKKIGQH PGTRKLYADK LAAQGLGETL GDDMAKAYRA AMDEGKHTVD PVLTNFKSKY
AVDWSPFLDQ KWTDAGDTAI PLAEWKRIAE KITTIPETVA PHQLVKKVYD DRAAMGRGEV
NVDWGMGEHM AFASLVASGY PVRLSGEDCG RGTFTHRHAV IHDQKREKWD EGTYIPLQNV
AENQAPFTVI DSILSEEAVL AFEYGYASND PNTLVVWEAQ FGDFANGAQV VIDQFIASGE
VKWGRVNGIT LMLPHGYEGQ GPEHSSARLE RFMQLAADTN MQIVQPTTAS QIFHVLRRQM
VRNLRKPLVI MTPKSLLRNK DATSPLSEFT KGGFQTVISE QDEAIAKKAD KVKRVIACSG
KVYYDLVKKR VEKDATDVAI IRVEQLYPFP HKAFAAELKK YPNATDIVWC QDEPQNQGAW
FFIQHNIHEN MLDGQKLGYA GRAASASPAV GYAHLHQEQQ KALVEAAFAK LKGFVLTK