| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1905 |
|---|
| Symbol | |
|---|
| ID | 7382266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2035102 |
|---|
| End bp | 2036367 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643655222 |
|---|
| Product | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase |
|---|
| Protein accession | YP_002553362 |
|---|
| Protein GI | 222111098 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATCG TAGAAGTCAA AGTCCCCCAG CTGTCCGAGT CCGTGGCCGA AGCCACCCTG
CTGCAGTGGA AGAAGAAGCC CGGCGAGGCC GTGGCAATCG ATGAAATCCT GATCGAAATC
GAGACCGACA AGGTGGTGCT GGAAGTGCCC GCACCGGCCG CCGGCGTGAT GGCCGAGATC
GTGGTCGCCG ACGGCGGCAC CGTGGCCTCC GACCAGGTCA TCGCCAAGAT CGACACCGAG
GGCAAGGCCG GCGCGGCCGC GCCGGCAGCT GCTGCCGCTG CACCGGCGCC CGCAGCGGCA
TCTGCCCCGG CGGCCGCTGC GCCTGCCGCT GCTGGCGGCA GCAAGGGCGA CGTGGCCATG
CCGGCCGCCG CCAAGCTGCT GGCCGACAAC AACCTGTCGG TCGGCGATGT GACGGGCTCC
GGCAAGGACG GACGCGTGAC CAAGGGCGAT GTGCTGGCCG CAGTGGCAGG CGGCGTGAAG
TCGACGGCCG CCGTGATCCC CACCGGCGTG CCCACCAAGG CGCTGCCCCA GGTAGCAGCC
CCGTCGTCCG CTGCTGATCT GGGCGAGCGC CCCGAGCAGC GCGTGCCCAT GAGCCGCTTG
CGTGCCCGCG TGGCCGAGCG TCTGCTGCAA TCGCAGTCCA CCAACGCCAT CCTCACCACG
TTCAACGAAG TGAACATGGC GCCGGTGATG GACCTGCGCA AGAAGTTCCA GGACGCATTC
ACCAAGGAGC ACGGCGTGAA GCTGGGCTTC ATGTCCTTCT TCGTAAAGGC CGCGGTGCAT
GCCCTCAAGA AGTACCCGGT GCTCAACGCC TCGGTGGACG GCAACGACAT CGTCTACCAC
GGCTACTTCG ACATCGGTAT CGCCGTGGGC TCGCCGCGCG GCCTGGTGGT GCCCATCCTG
CGCAACGCAG ACCAGATGAG CTTTGCCGAC ATCGAAAAGA AGATCGCCGA ATTCGGCAAG
AAGGCGGCCG ACGGCAAGCT GGGCATCGAA GAGATGACCG GTGGCACGTT CTCCATCTCC
AACGGCGGCA CCTTCGGCTC GATGATGTCC ACCCCCATCA TCAACCCGCC GCAGTCGGCC
ATCCTGGGCG TGCACGCCAC CAAGGACCGC GCCGTGGTCG AAAACGGCCA GGTCGTGGTG
CGTCCGATGA ACTACCTGGC CATGTCTTAT GACCACCGCA TCATCGACGG CCGCGAAGCC
GTGCTGGGCC TCGTGGCTAT GAAGGACGCG CTGGAAGACC CGTCGCGCCT GTTGTTCGAC
CTGTAA
|
|---|
| Protein sequence | MAIVEVKVPQ LSESVAEATL LQWKKKPGEA VAIDEILIEI ETDKVVLEVP APAAGVMAEI
VVADGGTVAS DQVIAKIDTE GKAGAAAPAA AAAAPAPAAA SAPAAAAPAA AGGSKGDVAM
PAAAKLLADN NLSVGDVTGS GKDGRVTKGD VLAAVAGGVK STAAVIPTGV PTKALPQVAA
PSSAADLGER PEQRVPMSRL RARVAERLLQ SQSTNAILTT FNEVNMAPVM DLRKKFQDAF
TKEHGVKLGF MSFFVKAAVH ALKKYPVLNA SVDGNDIVYH GYFDIGIAVG SPRGLVVPIL
RNADQMSFAD IEKKIAEFGK KAADGKLGIE EMTGGTFSIS NGGTFGSMMS TPIINPPQSA
ILGVHATKDR AVVENGQVVV RPMNYLAMSY DHRIIDGREA VLGLVAMKDA LEDPSRLLFD
L
|
|---|
| |