Gene Dtpsy_1900 details

Gene Information

• Locus tag: Dtpsy_1900
• ID: 7382261
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: -
• Start bp: 2028617
• End bp: 2030683
• Gene Length: 2067 bp
• Protein Length: 688 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643655217
• Product: helicase c2
• Protein accession: YP_002553357
• Protein GI: 222111093
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG1199] Rad3-related DNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCTTGA GCGATCTCGT CCTCCCGGTG TTTGCGCCCG ACGGACCCCT GGCGCGTGTG 
CGGCCTGATC TGCGTTCCCG CCCGGGGCAG GCGGCCATGG CCCTCGCTGT GGCGCAGGCC 
ATCAACGCCC GGGAGTCACT GGTGGTGGAA GCGGGAACGG GGATTGGCAA GACCTTTGCC 
TATTTGGTTC CCGCACTGCT GAGCGGCGAG CGTGTGCTCA TTTCCACGGC CACCAAGACA 
CTGCAGGACC AACTGTTGAC GCGCGACCTG CCGCTGCTGC AGCAGGCGCT GGCGCTTCCG 
CTACGCGTAG CGGCCCTCAA AGGCCGGGCC AATTACCTTT GCCTTTACCG ACTGGAGCAG 
GCGCGTCGCG ACGGGGAGGG GCATGACGAA GCAGTCGCCC ACGATCTGGC GTGTGTTGAG 
CGATGGGCCC AGTCCACGCG CAGCGGAGAC CTGGCGGAGG TCCCCGGTCT GGATGAATAC 
TCAGCCGCCT GGAGGCAGGT CACTTCGACG GTGGACAACT GCCTGGGTTC CGGGTGCCCG 
CGGTTGCGCC AATGCCATGT CTACCGGGCA CGGCACGACG CGCAGGCGGC GGATGTGCTC 
ATCATCAACC ACCACCTTTT CTTTGCGGAC CTCGGTGCGC AGGGGGCGGG GGCCGCGCAA 
CTGCTACCAG ACACCGGGGT CGTGGTGTTC GATGAAGCCC ATCGGTTGGC CGAGACCGCG 
GCCCAGTTCC TGGGCACGCA TGTCAGCACC AGCCAGCTGC TGCAACTTGG GCAGGATGTG 
GTGGCGGCTG GGGCGCGGCA TGCGCGCGGC GCTGCGGATT GGCAGGGGTT GCTCCAGCAC 
CTGCGCCAGT GCGCGCACGC GCTGCGCCTG GCGGTCGCTC CGGGCGAAGC TGCCGATGCA 
GCCGGCTCCC GCATCGCCTG GACGGGCGTC ACACCCGAGG CCTTGGATGC GTCAGCCTGG 
GACGGTGCGC TGGAGGGGGT GGTGGCGGCA CTCCGCGCGG TGCTGGCCGC ACTGGACGGC 
GTGGCGCAGC ACGCTCCCGA TCTGGCCCAC CTGCACAGCC GGACGGTTGC GTTGCTGGAG 
CGTGTACTGC ATTTCTGTTC CTCTGCGGAA GCTGGCACGG TGCGCTGGGT TGAATCTGCA 
GGCGCGTTGC GCATGGTGGA AACACCCCTG GATGTGGCCG GCGCCCTGCG CACGCTATGG 
AAGGGAAAGC CCCCCACGGA GGGCGCCTGG GACGAGAGCG ACGAACCGCC TGCCGCGTCC 
GCACCGCGTT CGTGGATCTA TACCTCCGCC ACGCTGGGCG ATGGCAAGGA CCTGCGCTGG 
TTCACCGATG CCTGTGGTTT GGAGGGTGCT CGTACCCTGC AGGTGCCTAG CCCCTTCGAC 
TACGCGCGGC AGGCGGCGCT GTATGTGCCA CCCGCACTCC CGCTGCCTTC CGACGCGGGG 
CACAGCGTTC AGCTTGCGCG CTGGGTGGGT GATGCCGTAG CACGGCTTGG CGGGCATACG 
CTGGTGTTGA CCACCAGTCT GCGGGCGCTT GCGGTGATCG CGGATGAGCT ATGCCGCCGG 
TTCGCGCCCG GCGGCGGCAT CGAGGTGCTG GTGCAGGGAC ATGCCTCACG GTCGCGCATG 
GTGGAGCGCT TTCGTGCCCA GCTTGACGCG AGCGGCCGGC CGGCGGGCCA TGTGCTCGTG 
GGGGCGGCGT CGTTCTGGGA GGGGATCGAC GTGCCGGGCG AGGCCCTGCA GATGGTGGTG 
ATCGACAAGC TGCCATTCCC CGCTCCGGGT GACCCGTGGG AGCAGGCGCA GGCACGGCGG 
CTGGCGGACC AGGGTGGCAA CGTGTTCCGC AGACACGCCC TGCCATCGGC GGCAGTGGCG 
CTCAAGCAGG GGGCCGGCCG GCTGATCCGC AACGAGAACG ACCACGGCAT ACTGGTCATC 
GCCGACACAC GTCTGTTGCA CAAGGGCTAT GGCAAGCCTC TGCTGCGGGC ATTGCCCCCC 
ATGCGGAGGC TGCATACGCA GGAAGAGTTC GGCGCGGCGC TGGATGCCCT TACCAGAACT 
TCCACCAGGG GTTCGCCTTC GCCTTGA 

 

Protein sequence

MSLSDLVLPV FAPDGPLARV RPDLRSRPGQ AAMALAVAQA INARESLVVE AGTGIGKTFA 
YLVPALLSGE RVLISTATKT LQDQLLTRDL PLLQQALALP LRVAALKGRA NYLCLYRLEQ 
ARRDGEGHDE AVAHDLACVE RWAQSTRSGD LAEVPGLDEY SAAWRQVTST VDNCLGSGCP 
RLRQCHVYRA RHDAQAADVL IINHHLFFAD LGAQGAGAAQ LLPDTGVVVF DEAHRLAETA 
AQFLGTHVST SQLLQLGQDV VAAGARHARG AADWQGLLQH LRQCAHALRL AVAPGEAADA 
AGSRIAWTGV TPEALDASAW DGALEGVVAA LRAVLAALDG VAQHAPDLAH LHSRTVALLE 
RVLHFCSSAE AGTVRWVESA GALRMVETPL DVAGALRTLW KGKPPTEGAW DESDEPPAAS 
APRSWIYTSA TLGDGKDLRW FTDACGLEGA RTLQVPSPFD YARQAALYVP PALPLPSDAG 
HSVQLARWVG DAVARLGGHT LVLTTSLRAL AVIADELCRR FAPGGGIEVL VQGHASRSRM 
VERFRAQLDA SGRPAGHVLV GAASFWEGID VPGEALQMVV IDKLPFPAPG DPWEQAQARR 
LADQGGNVFR RHALPSAAVA LKQGAGRLIR NENDHGILVI ADTRLLHKGY GKPLLRALPP 
MRRLHTQEEF GAALDALTRT STRGSPSP