| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1898 |
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| Symbol | |
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| ID | 7382259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 2024183 |
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| End bp | 2027722 |
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| Gene Length | 3540 bp |
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| Protein Length | 1179 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643655215 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_002553355 |
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| Protein GI | 222111091 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGTCC ACTTGCGCTT GCACACTGAA TTTTCCGTCG TGGACGGAAC CACCCGTATC
GACGAGGTCG TCAAGGCGGC GGCGAAAGAC GGCCAGCCCG CCCTGGCGAT CACGGATCTG
AACAACCTGT TCGGCGCGAT CAAGTTTTAC AAGGAAGGCC GGGGCAAGGG CGTCAAGCCC
ATCCTGGGCG CCGAAATCTA CCTGGAGGGC GAAGCGGCAG GCGCACCCTC GCGCATGGTG
CTGCTGGTGC AGAACCGCAC CGGGTATCTG AACCTCTCCG AACTGCTGGC CCGCGCGTGG
ACGCGCAACA TCGTCAGGAA CCAGGCGCTG TGCACCTGGG AGTGGCTGCA GGAATTGGGC
GACGGCCTGA TAGCCCTCGC TGGAGCGCAG GCCGGTCCCG TGGGGCAGGC GCTCATGAAG
GGCGATGACG CCGGAGCTGC GCAGCTGGCG CTGCGTCTGG CGGGCATCTT CCCGCACCGC
TTCTACCTGG AGGTCCAGCG CGCCGGACGC CCTGACGACG AAGCCCATGT CACCGCGGCG
GTACAGCTTG CCGCGCGCCT GGCCCTGCCG GTGGTAGCCA CCCACCCGGT GCAGTTCGCA
ACGCCGGACG ATTACGAGGC GCACGAGGCG CGCGTGTGCA TTGCCGAGGG CGAGATCTTG
GCGAATCCGC GGCGCGTGCG CCGTTTCACG CGCGAGCAGT ATTTCAAGAG CAGTGCCGAG
ATGGAAGCGC TGTTCGCCGA CGTACCCAGC GCCCTCGCCA ACACCGTGGA GGTGGCCAAG
CGCTGCAATG TGTCGCTGGT GCTGGGCAAG CCGCAACTGC CGAACTTCCC CATTCCGGGT
GGGATGACGA TGGAGCAGTA CTTCCGCCAC GCGTCCCACG AGGGCCTGGA GGAGCGGCTG
CTGCACCTGT ACCCGGACAC CGCCGAGCGC GACCGCCAGC GCCCCCGCTA CCAGGAGCGG
CTGGAGTTTG AACTGGGCAC GATCCTGAAG ATGGGCTTTC CCGGCTACTT CCTCATCGTG
GGTGACTTCA TCCAGTGGGC CAAGAAGAAC GGCTGCCCGG TGGGCCCCGG GCGCGGCTCG
GGTGCGGGCT CGCTCGTGGC CTATGCGCTC AAGATCACGG ATCTGGATCC GCTGCAATAC
AACCTGCTGT TCGAGCGCTT CCTGAACCCC GAGCGGGTGT CCATGCCCGA CTTCGACATC
GATTTTTGCC AGGCCAACCG CGACCGCGTG ATCGACTATG TGAAGGACAA GTACGGCAAG
GAGGCCGTGA GCCAGATCGC CACGTTCGGC ACGATGGCGG CCAAGGCTGC CATCCGCGAC
GTGGGGCGGG TGATGGATAT GAGCTACACG TTCTGTGACG GTATCTCGAA GCTGGTGCCC
GGCAAACCCG GCCAGACCTA TACGCTGGCC TACCCGCCAG AGCCCAAGAA GGAAGGGGAC
AAGAACAACT ACGCCCTGGA GTTGGAACCC ATCCTGTACG AGCGCGTGCG CAAGGAGGAG
GACGTGCGCA CCATCATCGA GATGGCGCAA AAGCTCGAAG GGATGACGCG CAATATTGGC
ATGCACGCCG GCGGCGTGCT GATCGCGCCG GGCAAACTGA CCGATTTCTG CCCGCTGTAC
CAGCAGCCAG GCAGCGAATC GGCGGTGAGC CAGTACGACA AGGACGACGT GGAGGCCATC
GGCCTGGTGA AATTCGACTT CCTGGGCTTG GCGACGCTGA CCATCCTGGA AATCGCGCGT
GAGTTCATCA TGCAGCGTCA CAAAGGGCAG GAAAACTTCG CGTTCGAGAA CATTCCCCTG
GACGATGCTG CGACCTACAA ACTGTTCTCG GACGGCAAGA CAGAAGCCGT GTTCCAGTTT
GAAAGCCGGG GCATGCAAGG CATGCTCAAG GAAGCGCGCC CAAGCAGGCT GGAAGACCTA
ATCGCCTTGA ATGCCCTGTA CCGGCCCGGC CCCATGGACC TGATTCCCAG CTTCGTGAAC
CGCAAGCACG GCAAGGAGGT GGTGGAGTAC CCGCATCCGC TGGTGGAGCC CGTGCTGGCC
GAGACCTACG GCATCATGGT CTACCAGGAG CAGGTGATGC AGACGGCGCA GGTGCTGGGT
GGTTACTCGC TCGGCGGCGC CGACATGCTG CGCCGCGCCA TGGGCAAGAA AAAGGCCGAG
GAAATGGCCG AGCACCGTGC CATCTTCCGC AAGGGTGCAG CCGAAAAGGG TATCAGTCAG
GACAAGGCCG ACGAGGTCTT CGACCTGATG GAAAAGTTTG CGGGTTACGG CTTCAACAAG
TCGCACGCCG CCGCCTATTC GCTGCTGGCC TACCACACCG GGTGGCTCAA GGTGCACTAC
ACGGCGGAGT TTTACTGCGC CAATATGACC GTGGAAATGG ACGACACCGA CAAGCTCAAG
GTGCTCTATG AAGATGCGGT CAAACATTTC GGCATGACCT TCGAGCCGCC GGACATCAAC
CGCGGCAATT ACCGCTTCGA GCCGGTGACG GACAAGGTCA TCCGCTATGG CCTGGGCGCA
GTCAAGGGCA CGGGACAGCA GGCGATCGAG GCCATCATCG CTGCACGCGA AGGGCAGGGC
GTGGGCCCAC AGGGCGCAAC CCGGGGGCCT TTCAAGAGCT TGTTTGACTT TTGCGTACGC
GTGGACCGCA CGCGCGTCAA CAAGCGCACG GTGGAGGCGC TCATCAAGGC GGGCGCCTTC
GATGCCCTGC AGCTCAACCG TGCCGCGCTC GTGGCATCCC TCGATCGGGC GTTCGAGTTT
GCCAATGCGC AGATCGCCAA CGCCAACCAA GGCGGGCTGT TCGACATGAT GGGCGATGAC
GCCATCGGCT CCAGCACGCA GGAGCCTGAT CTGGTGGATG TGATGCCCTG GGGCATCAAG
GAACGGCTGA TGCAGGAGAA GACCGCGGTG GGCTTCTACC TCTCGGGCCA CCTGTTCGAT
GAAGTGCACC AGGAAGTGCG CCGCTTCGTG CGCACTGCTA TCGACGAATT GGTGGACAGC
CGCGAGACGC AGGTGGTCGC CGGCATCGTG AGTGACTACC GCGTCATCAA CGGGCAGCGC
GGCAGGCTGG CGTTGTTCAA GCTGGACGAC AAGTCGGGCG TCATCGAGGC TTCCGCCGAC
GAAGGGCTGA TCAATGCGAA CGCCGGCCTG CTCAAGGACG ATGAATTCGT AGTGGTGAGT
GGTCGGCTGC AGTTGGACCA CTTCAGCGGA GGCCTGCGCA TGAAGGTGCA GCAGGTCTGG
GATTTGGCGG GTGCGCGGGC ACGCTATGGG CGCTATCTGC AGGTGTGCCT GGGGCAGCAG
TTGCCAGACA TCGGGGCGCT GGTGCGTGAC TATCCTCCGC AACGGGAGGA AACCGAGCAC
GGCGAGGTGC TTACCCATGG CCTGCGCGTG CGCATGCAGT TGCGCTGCAC AGCGGCGGCT
GGCGCGGCCA CGGCCGAGGT GCAGTTGGGA GAGGCCAGCC GGTTCTTTCC CAGCGATGCT
GCGCTGGCCG CGTGGAGCGC TCAGGCGGGC AGCGGTGCTG TGAATGTGGT CTATGAGTAG
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| Protein sequence | MFVHLRLHTE FSVVDGTTRI DEVVKAAAKD GQPALAITDL NNLFGAIKFY KEGRGKGVKP
ILGAEIYLEG EAAGAPSRMV LLVQNRTGYL NLSELLARAW TRNIVRNQAL CTWEWLQELG
DGLIALAGAQ AGPVGQALMK GDDAGAAQLA LRLAGIFPHR FYLEVQRAGR PDDEAHVTAA
VQLAARLALP VVATHPVQFA TPDDYEAHEA RVCIAEGEIL ANPRRVRRFT REQYFKSSAE
MEALFADVPS ALANTVEVAK RCNVSLVLGK PQLPNFPIPG GMTMEQYFRH ASHEGLEERL
LHLYPDTAER DRQRPRYQER LEFELGTILK MGFPGYFLIV GDFIQWAKKN GCPVGPGRGS
GAGSLVAYAL KITDLDPLQY NLLFERFLNP ERVSMPDFDI DFCQANRDRV IDYVKDKYGK
EAVSQIATFG TMAAKAAIRD VGRVMDMSYT FCDGISKLVP GKPGQTYTLA YPPEPKKEGD
KNNYALELEP ILYERVRKEE DVRTIIEMAQ KLEGMTRNIG MHAGGVLIAP GKLTDFCPLY
QQPGSESAVS QYDKDDVEAI GLVKFDFLGL ATLTILEIAR EFIMQRHKGQ ENFAFENIPL
DDAATYKLFS DGKTEAVFQF ESRGMQGMLK EARPSRLEDL IALNALYRPG PMDLIPSFVN
RKHGKEVVEY PHPLVEPVLA ETYGIMVYQE QVMQTAQVLG GYSLGGADML RRAMGKKKAE
EMAEHRAIFR KGAAEKGISQ DKADEVFDLM EKFAGYGFNK SHAAAYSLLA YHTGWLKVHY
TAEFYCANMT VEMDDTDKLK VLYEDAVKHF GMTFEPPDIN RGNYRFEPVT DKVIRYGLGA
VKGTGQQAIE AIIAAREGQG VGPQGATRGP FKSLFDFCVR VDRTRVNKRT VEALIKAGAF
DALQLNRAAL VASLDRAFEF ANAQIANANQ GGLFDMMGDD AIGSSTQEPD LVDVMPWGIK
ERLMQEKTAV GFYLSGHLFD EVHQEVRRFV RTAIDELVDS RETQVVAGIV SDYRVINGQR
GRLALFKLDD KSGVIEASAD EGLINANAGL LKDDEFVVVS GRLQLDHFSG GLRMKVQQVW
DLAGARARYG RYLQVCLGQQ LPDIGALVRD YPPQREETEH GEVLTHGLRV RMQLRCTAAA
GAATAEVQLG EASRFFPSDA ALAAWSAQAG SGAVNVVYE
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