Gene Dtpsy_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1892 
Symbol 
ID7382253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp2015798 
End bp2016973 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content68% 
IMG OID643655209 
Productsuccinyl-diaminopimelate desuccinylase 
Protein accessionYP_002553349 
Protein GI222111085 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCCCA CCCTGCTACT GACCGAACAG CTCATCGCCC ACCCCTCCGT CACGCCCGAC 
GACGCGGGCT GCCTGGACCT GCTGGCCCGG CGCCTCGCTC CCTTGGGCTT TGCCTGCGAA
CGACTGGACA GCGGGCCCGA GAACTTCCGC GTCAGCAATT TGTGGTCAAA ACGCACTGCA
GCGCGCTCTG GACAAGCGCA AGCAGCTACC AAAACAGTAG TATTTGCCGG CCACACCGAC
GTGGTGCCCA CGGGCCCCGT GGAGCAGTGG AGCAGCCCGC CGTTCACCCC CACACACCGG
GACGGCCGCC TGTACGGCCG CGGCGCGAGT GACATGAAGG CCTCGATCGC CGCATTCGTC
GTCGCGGTCG AGGAGTTCCT GGCCGCCACG CCCGACCCGC GCCTGGATAT CGCGCTGCTG
CTGACCAGCG ACGAGGAAGG CCCCTCGGTG GACGGTACCA AGGTGGTCAT TGAGCAGCTG
CGCGCGCGCG GGGAGCGGCT GGACTGGTGC ATCGTGGGCG AACCCACCTC GGTCGAGCAG
ACCGGCGACA TGATCAAGAA CGGCCGCCGC GGCACGCTGT CCGGGCGGCT CACCGTGCGG
GGGGTGCAGG GCCACATCGC CTACCCGCAG CTGGCGCGCA ACCCCATCCA TCAGGCCGTG
CCCGCGCTCA CCGAGCTCGC CGCCACCGTG TGGGATGAGG GCAACGCCTT CTTTCCGCCG
ACCAGCTGGC AGATGAGCAA CATCCACGGC GGCACCGGCG CGACCAACGT GATCCCCGGC
CAGGTGGTGA TCGACTTCAA CTTCCGCTTC AGCACCGAAT CGACCGCCGA AGGGCTGCAG
CAGCGCGTGC ATGCGGTATT GGACCGCCAC GGACTGGAAT ACGACCTGAC CTGGACGCTG
GGCGGCCAGC CCTTCCTGAC CACGCCGGGC GAACTGGTGC AGGCGGTGCA GCAAGCCATC
CGCGCCGAGA CCGGTCTGGA AACCGAGCTG TCCACCACCG GCGGCACCAG CGACGGGCGC
TTCATTGCAC AGATTTGCCC CCAGGTGATC GAGCTGGGCC CGCCCAACGC CAGCATCCAC
AAGATCGACG AGAACGTGCG CTTGGTCGAC ATCGAGCCGC TCAAGAACAT CTACCGCCGC
ACGCTCGACC ACCTCAACGC ACTGGCGGGC GCATGA
 
Protein sequence
MSPTLLLTEQ LIAHPSVTPD DAGCLDLLAR RLAPLGFACE RLDSGPENFR VSNLWSKRTA 
ARSGQAQAAT KTVVFAGHTD VVPTGPVEQW SSPPFTPTHR DGRLYGRGAS DMKASIAAFV
VAVEEFLAAT PDPRLDIALL LTSDEEGPSV DGTKVVIEQL RARGERLDWC IVGEPTSVEQ
TGDMIKNGRR GTLSGRLTVR GVQGHIAYPQ LARNPIHQAV PALTELAATV WDEGNAFFPP
TSWQMSNIHG GTGATNVIPG QVVIDFNFRF STESTAEGLQ QRVHAVLDRH GLEYDLTWTL
GGQPFLTTPG ELVQAVQQAI RAETGLETEL STTGGTSDGR FIAQICPQVI ELGPPNASIH
KIDENVRLVD IEPLKNIYRR TLDHLNALAG A