Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1892 |
Symbol | |
ID | 7382253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 2015798 |
End bp | 2016973 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643655209 |
Product | succinyl-diaminopimelate desuccinylase |
Protein accession | YP_002553349 |
Protein GI | 222111085 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCCCA CCCTGCTACT GACCGAACAG CTCATCGCCC ACCCCTCCGT CACGCCCGAC GACGCGGGCT GCCTGGACCT GCTGGCCCGG CGCCTCGCTC CCTTGGGCTT TGCCTGCGAA CGACTGGACA GCGGGCCCGA GAACTTCCGC GTCAGCAATT TGTGGTCAAA ACGCACTGCA GCGCGCTCTG GACAAGCGCA AGCAGCTACC AAAACAGTAG TATTTGCCGG CCACACCGAC GTGGTGCCCA CGGGCCCCGT GGAGCAGTGG AGCAGCCCGC CGTTCACCCC CACACACCGG GACGGCCGCC TGTACGGCCG CGGCGCGAGT GACATGAAGG CCTCGATCGC CGCATTCGTC GTCGCGGTCG AGGAGTTCCT GGCCGCCACG CCCGACCCGC GCCTGGATAT CGCGCTGCTG CTGACCAGCG ACGAGGAAGG CCCCTCGGTG GACGGTACCA AGGTGGTCAT TGAGCAGCTG CGCGCGCGCG GGGAGCGGCT GGACTGGTGC ATCGTGGGCG AACCCACCTC GGTCGAGCAG ACCGGCGACA TGATCAAGAA CGGCCGCCGC GGCACGCTGT CCGGGCGGCT CACCGTGCGG GGGGTGCAGG GCCACATCGC CTACCCGCAG CTGGCGCGCA ACCCCATCCA TCAGGCCGTG CCCGCGCTCA CCGAGCTCGC CGCCACCGTG TGGGATGAGG GCAACGCCTT CTTTCCGCCG ACCAGCTGGC AGATGAGCAA CATCCACGGC GGCACCGGCG CGACCAACGT GATCCCCGGC CAGGTGGTGA TCGACTTCAA CTTCCGCTTC AGCACCGAAT CGACCGCCGA AGGGCTGCAG CAGCGCGTGC ATGCGGTATT GGACCGCCAC GGACTGGAAT ACGACCTGAC CTGGACGCTG GGCGGCCAGC CCTTCCTGAC CACGCCGGGC GAACTGGTGC AGGCGGTGCA GCAAGCCATC CGCGCCGAGA CCGGTCTGGA AACCGAGCTG TCCACCACCG GCGGCACCAG CGACGGGCGC TTCATTGCAC AGATTTGCCC CCAGGTGATC GAGCTGGGCC CGCCCAACGC CAGCATCCAC AAGATCGACG AGAACGTGCG CTTGGTCGAC ATCGAGCCGC TCAAGAACAT CTACCGCCGC ACGCTCGACC ACCTCAACGC ACTGGCGGGC GCATGA
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Protein sequence | MSPTLLLTEQ LIAHPSVTPD DAGCLDLLAR RLAPLGFACE RLDSGPENFR VSNLWSKRTA ARSGQAQAAT KTVVFAGHTD VVPTGPVEQW SSPPFTPTHR DGRLYGRGAS DMKASIAAFV VAVEEFLAAT PDPRLDIALL LTSDEEGPSV DGTKVVIEQL RARGERLDWC IVGEPTSVEQ TGDMIKNGRR GTLSGRLTVR GVQGHIAYPQ LARNPIHQAV PALTELAATV WDEGNAFFPP TSWQMSNIHG GTGATNVIPG QVVIDFNFRF STESTAEGLQ QRVHAVLDRH GLEYDLTWTL GGQPFLTTPG ELVQAVQQAI RAETGLETEL STTGGTSDGR FIAQICPQVI ELGPPNASIH KIDENVRLVD IEPLKNIYRR TLDHLNALAG A
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