Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1889 |
Symbol | |
ID | 7382250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 2012499 |
End bp | 2013713 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643655206 |
Product | succinyldiaminopimelate transaminase |
Protein accession | YP_002553346 |
Protein GI | 222111082 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCCC TGCTCTCCCT ACTGCAGCCC TATCCGTTCG AGCGGCTGCG ACAGCTTTTT GCGGGGGTGA CGCCCTCGGC CGCACACCGC GCCATCAGCC TGGGCATCGG CGAGCCACGC CATGCAACGC CGCCGTTCAT CCAGGAGGCC CTGGCCGCCA ACCTGGCAGG CCTGGCCAGC TACCCCTCCA CCGCCGGTGA CCCCAGCCTG CGCGAAGCCT GTGCCGGCTG GATGCAGCGG CGCTACCATA TTCCCGTCAA CCCCGCCACG CAGGTGCTGC CGGTGAACGG TTCGCGCGAG GCGTTGTTCG CATTCGCGCA AACCGTGGTG GACCCCACCC GCGCAGGCGC CACCGTGGTG TGCCCCAACC CGTTCTACCA AATCTATGAA GGCGCCACGC TGCTGGCCGG CGCCACGCCG TACTACGCCC CGAGCGATCC AGCGCGCAAC TTTGCCGTGG ACTGGGACAG CGTGCCCGAG GAGGTATGGC AGCGCACGCA ACTGCTCTTC GTGTGCTCGC CCGGCAACCC CACGGGCGCC GTGATGCCCC TGCCCGAGTG GGAGAAGCTC TTCGCGCTGA GCGACCGTTA CGGTTTCGTG ATCGCCTCGG ATGAGTGCTA CAGCGAAATC TACTTCCGCG ACGAGCCACC ACTGGGCGGC CTGGAGGCTG CAGCCAAGCT CGGACGCAGC GACTACCGCA ACCTGATCGC CTTCACCAGC CTGTCCAAGC GCAGCAACGT GCCGGGCCTG CGCAGCGGCT TCGTGGCGGG CGACGCGGCA CTCATCAAGG CGTTTTTGCT GTACCGCACC TACCACGGCA GTGCCATGGG GCCCGCCGTG CAGGCCGCCA GCGTGGCTGC CTGGAACGAT GAGGTGCACG TGGAAGAAAA CCGTGCCCTT TACCGCCAGA AGTTCGCCCA GGTCACGCCC ATGCTCGCCG AGGTGATGGA CGTGCGCCTG CCCGACGCGG GTTTCTACCT CTGGGCCAAG GTGCCCGACG CCCTGGGCAT GAGCGATGCG GAGTTCGCCC AGGCCCTGCT GGCTCAATAC AATGTCACGG TATTGCCGGG CAGCTATCTC GCCCGCGATT CCGGTGGCGC CAACCCCGGC GCCCAGCGCT TGCGCATGGC CCTTGTGGCC GAGACCGCGG AATGCGCCGA AGCGGCCTCG CGCATCGTGC AATTCATCCA ATCCCGTACG TTATTCCATC CATGA
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Protein sequence | MNPLLSLLQP YPFERLRQLF AGVTPSAAHR AISLGIGEPR HATPPFIQEA LAANLAGLAS YPSTAGDPSL REACAGWMQR RYHIPVNPAT QVLPVNGSRE ALFAFAQTVV DPTRAGATVV CPNPFYQIYE GATLLAGATP YYAPSDPARN FAVDWDSVPE EVWQRTQLLF VCSPGNPTGA VMPLPEWEKL FALSDRYGFV IASDECYSEI YFRDEPPLGG LEAAAKLGRS DYRNLIAFTS LSKRSNVPGL RSGFVAGDAA LIKAFLLYRT YHGSAMGPAV QAASVAAWND EVHVEENRAL YRQKFAQVTP MLAEVMDVRL PDAGFYLWAK VPDALGMSDA EFAQALLAQY NVTVLPGSYL ARDSGGANPG AQRLRMALVA ETAECAEAAS RIVQFIQSRT LFHP
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