Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1877 |
Symbol | |
ID | 7382238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1998726 |
End bp | 1999751 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643655194 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_002553334 |
Protein GI | 222111070 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.369325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGACCGCCA ACCGACGACC GCGCCGCTCC AGCGGCCGCA TCACCCTGAA CGACGTGGCA GGCGCCGCCG GCGTGAGTCC CATCACCGTG TCGCGTGCCC TGCGCGGCGA ACGCACCGTG GACCCCGCGT TGGCCGAACG CGTACGCGAG GCGGCCGATC GGCTGGGCTA CGTACCCGAC CCGGCCGCGC GCGCGCTGGC GTCGCAGCGC AGCACGCAGG TGCTGGTGCT GGTGCCGCTG CTGTCCAACG CGCTGTTCGT GGATCTGCTG GAGGCGGTGC ACCGCACGCT GTTCCCCAAG GGCTTTCAGC CGCTCATCGG CGTGACCCAC TACGACAGCG CCGAGGAAGA GTTGCTGCTG CGCACCTACC TGCCCCACCG CCCCGCCGGC CTGCTGGTGA CGGGGTTCGA CCGCAGCGAG GCCGCACGCC AGCTCATCGT GCACAGCGGC GTGCCGTGCG TGCACCTCAT GGAGACCAGC GCCGCGCCTG GTGTGGCCTG CGTGGGCTTT TCGCAGCAGG ACGCGGGCGC CACCATCACG CGCCACCTGC TGGAACGCGG GCGTAAGCGC ATCGCCTTTT GCGCCGCGCA ACTGGACCCG CGCGTGCTGC AGCGCGCCGA AGGGTACCGG CGCACCCTGC GCGAAGCGGG CCTGTACGAT CCGCGCCTGG AGTTGCTAAG CCCCGAGCGC TCTTCCATCG CCCTGGGCGC CCGGCTGTTC GAGGACCTGG TGCAACGCAT GCCCGACGTG GACGCCATCT TCTTTTGCAA CGACGACATT GCCCAGGGCG GGCTGCTGGC GGCCAACCGC ATGCGCATCG ACGTGCCGGG CCGCATCGCC GTCGCGGGAT TCAACGACTT GGCCGGCAGC GCGCAGATGG TGCCGCCGCT GACCACCATC CGCACACCGC GCAGCGAAGT CGGCCGCGCC GGCGCCGACA TGCTGCTGGG CCTGATGCGC GGCACGCTGG CGCAGCCGCA GTGCGTGCAG CTGGACTACG AGCTGATCGT GCGCGAGAGT ACGTGA
|
Protein sequence | MTANRRPRRS SGRITLNDVA GAAGVSPITV SRALRGERTV DPALAERVRE AADRLGYVPD PAARALASQR STQVLVLVPL LSNALFVDLL EAVHRTLFPK GFQPLIGVTH YDSAEEELLL RTYLPHRPAG LLVTGFDRSE AARQLIVHSG VPCVHLMETS AAPGVACVGF SQQDAGATIT RHLLERGRKR IAFCAAQLDP RVLQRAEGYR RTLREAGLYD PRLELLSPER SSIALGARLF EDLVQRMPDV DAIFFCNDDI AQGGLLAANR MRIDVPGRIA VAGFNDLAGS AQMVPPLTTI RTPRSEVGRA GADMLLGLMR GTLAQPQCVQ LDYELIVRES T
|
| |