| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1874 |
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| Symbol | |
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| ID | 7382235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1996155 |
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| End bp | 1997435 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643655191 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_002553331 |
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| Protein GI | 222111067 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.800904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGTTA CCGCCATCTT TCTTCTGGTG CTCATCGGCG GCATGGTGAT CGGCATGCCC
ATCGCCCACG CCCTGGTGCT GACGGGTGTC GCCCTGATGT GGCACCTGGA CTTCTTCGAT
TCGCAGCTGC TGGCGCAAAA CCTGCAGGCC GGCTTTGACA ACTTTCCGCT GCTGGCCGTG
CCGTTCTTCA TCCTGGCGGG CGAGCTGATG AACGCGGGCG GCCTGTCGCG GCGCATCATC
GACCTGGCGC GCGCCTTCGT GGGGCATATC CGCGGCGGGC TGGGCTTCGT GGTGATTGGC
GCGGCCGTGC TGTTGGCGTC CATGAGCGGC TCGGCCATTG CCGACACGGC GGCGCTGGCC
ACCATCCTGC TGCCGATGAT GCGCGAGCAG AAATACCCGA TGAGCTACAG CGCGGGCCTG
CTGGCGTCCG GCGGCATCAT CGCGCCGATC ATCCCGCCGT CCATGCCGTT CGTGATCTAC
GGGGTGACGA CGAATACCTC GATCAGCAAG CTGTTCCTCT CGGGCGTGGC ACCGGGCCTG
ATGATGGGCA TCTTCCTGAT TGGCGCCTGG GCCTGGATTG CGCGCCGCCA CGACCTGCCC
TCGATGGAGC GTGTGGCGTG GGGCCCGCGC ATGAAGGCGC TGGCGAAGAG CTTCTGGGCC
ATGATGATGC CGGTCATCAT CCTGGGCGGC CTGCGCGGCG GCATTTTCAC GCCCACCGAG
GCCGCCGTGG TCGCCGCCGT GTATGCGCTG CTGGTGTCCA TGTTCGTGTA CCGCGAACTG
AACTGGTCGC AGCTGTACGA CGTGTTCCTG GCCGCGGGCA AGACCACGGC GGTGGTCATG
TTCCTGTGCG GCGCCGCCAC CGTCACGGCC TACATGATCA CCCTGGCCGA CCTGCCCAAC
ATGCTGGCCG ACAGCTTCGC CGGCGTGATG GGCAACCCCG TGCTGTTCAT GGCGCTGATG
ATGACCTTCC TGTTGGTGGT GGGCACGGCC ATGGACCTCA CGCCCACCAT CCTGATCTTC
GGCCCCGTCT GCGCGCCGCT GGCCGCCAAG GCGGGCATCG ACCCCGTGTA CTTCGGCTTC
ATGTTCATCT ATGTGGGTTG CATCGGCCTG ATCACGCCGC CCGTGGGCAC GGTGCAGAAC
GTGGTGGCGG GTGTGGGCCG GCTGCGCATG GAAACCGTGA TCAAGGGCAC GACGCCTTTC
CTGGCCGTGT ATGTGCTGCT GGCGGTCCTG TTCACGCTGT TCCCGGCCCT CATCACCGCG
CCGCTGCGCT GGATGCACTG A
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| Protein sequence | MIVTAIFLLV LIGGMVIGMP IAHALVLTGV ALMWHLDFFD SQLLAQNLQA GFDNFPLLAV
PFFILAGELM NAGGLSRRII DLARAFVGHI RGGLGFVVIG AAVLLASMSG SAIADTAALA
TILLPMMREQ KYPMSYSAGL LASGGIIAPI IPPSMPFVIY GVTTNTSISK LFLSGVAPGL
MMGIFLIGAW AWIARRHDLP SMERVAWGPR MKALAKSFWA MMMPVIILGG LRGGIFTPTE
AAVVAAVYAL LVSMFVYREL NWSQLYDVFL AAGKTTAVVM FLCGAATVTA YMITLADLPN
MLADSFAGVM GNPVLFMALM MTFLLVVGTA MDLTPTILIF GPVCAPLAAK AGIDPVYFGF
MFIYVGCIGL ITPPVGTVQN VVAGVGRLRM ETVIKGTTPF LAVYVLLAVL FTLFPALITA
PLRWMH
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