| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1847 |
|---|
| Symbol | |
|---|
| ID | 7382208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 1965500 |
|---|
| End bp | 1967329 |
|---|
| Gene Length | 1830 bp |
|---|
| Protein Length | 609 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643655164 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_002553304 |
|---|
| Protein GI | 222111040 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCCT CCACCCCCGA CCTGCGCGGC GTGCAGACGC TGCCCGAACT GCTGGCGTTC
CGCGCCGCCC TCACTCCCCA CAGCGAGGCC TACCGTGCCT GCGACCCCGG CACCGGCCAG
TGGATCAGCC TGACCTGGGC TCAGACCCAG GAGCGCGTGC AGCAGTGGGG CCGCGCCATT
GCCGCATCGG GCCTGCCACA GGGGGCGCGC ATCGCCATCC TGCTGCCCAA CGGGCTGGAT
GCCATGAGCA TCGACCAGGC CGTGATGGCC ACGGGCTGTG TGCCCGTGCC CCTGCATGCC
ATCGACAATC CGGGCAGCAT CGCCTACATC CTGGCGGATG CCGAGGTGTC GCTGCTCGTC
GTGGAAGAAC CCGAGCAATG GCGGCGCATC CGCGACGTGG GCATGCCGCT TCCGCACCTG
ATGGGCGTGG TGACGACCAA CGCCAGCACC GGGCTGCCCA CCGCCGCCGA GCAGGACGTA
CCGGTCGCAC CACTGGCTGC ATGGCTGCAG CATGCCGCGG CAGATACGCC GCTGCCCCCG
CCGCCCGGCC CTGAGGATCT GGCGGCGATC GTCTACACCA GCGGCACCAC CGGCAAGCCC
AAGGGGGTGA TGCTCAGCCA TGCCAACGTG GTGGCCGACG TGAAGGCGGT GCTGGAGCGC
ATCGCCCCCA CGCCACAGGA TGTGTTCCTG TCCTTCCTGC CGCTGTCGCA CACCTTCGAG
CGCACGGGCG GCTACTACCT GCCCATGGCC TCGGGCAGTT GCGTGGTCTA TGCGCGCTCG
GTGGCGCAAC TGGCGGAGGA CTTGAAGAAT GTGCGCCCCA CGGTGCTGGT GTCGGTGCCG
CGCATTTATG AACGCGTGCA TGCCAAGCTC ATCGAGACGC TGTCGCCCTC GCCCTTGAAG
ATGCAGCTGT TCCAGGCCGC GCAGGCCGTG GGCTGGAAGC GGTTTTGCGC CGCGCAGCGC
CTGCCAGCAC CCCAGGACGA CGGCGCGGGC GGCTGGATGC GCGCCCTGCC CTGGCCGCTG
CTGCGTGCGC TGGTGGCCAA GCCGCTGCTG GCGCAGTTCG GTGGCCGCGT GCGCGTGGCC
GTGAGCGGGG GCGCGCCGCT GTCGCCCACC ATCGCGCACT GCTTCCTGGG CCTGGGCCTG
CAACTGGTGC AGGGCTACGG CATGACCGAA ACCACGCCCG TGGTCAGCGT GAACACGCTG
GAGGATAACG ACCCGTCTAC CGTCGGCCGC GCCTTGCCGG GCGTGGAGGT GCGCATCGGC
GAGAACCGCG AACTGCAGGT GCGCGGCCCC ATCGTCATGA AGGGCTACTG GAAGCGCCCC
GAGGATACGG CCCGCACCGT CTCCGCCGAC GGCTGGCTGG GCACGGGCGA CCAGGCCGAG
ATCGTCGACG GCCGCATCCG CATCCTGGGA CGCATCAAGG AAATCATCGT CACCTCCACG
GGCGAGAAGG TGCCGCCGGC CGACCTGGAG CTGGCCATCA CCGCCGATGC ACTGTTCGAG
CAGGCCTTTG TGGTGGGCGA GCAGCGCCCC TTCATCGCCT GCGTGGCCGT GGTGCATGCC
GAAGAGTGGC GCCAACTGGC CGGGCAACTG GGACTGGACG CCAACGACCC TGCCAGCCTT
GCGCACCCCA GCGCCCAACG GGCGGCACTG GCGCGCATCG AGAAGCTGGC GGCCGGCTTC
CCGCGCTATG CGGTGCCGCG CGCCGTGCAT CTGGTGCGCG AGCCATGGAC GATCGAGAAC
GCGTTCATGA CACCCACGCT CAAGCTCAAG CGCACCAACC TCATGGCGCA CTACGCGGCC
GCCATCGAGG CCATGTACCA AAAGCGCTGA
|
|---|
| Protein sequence | MNSSTPDLRG VQTLPELLAF RAALTPHSEA YRACDPGTGQ WISLTWAQTQ ERVQQWGRAI
AASGLPQGAR IAILLPNGLD AMSIDQAVMA TGCVPVPLHA IDNPGSIAYI LADAEVSLLV
VEEPEQWRRI RDVGMPLPHL MGVVTTNAST GLPTAAEQDV PVAPLAAWLQ HAAADTPLPP
PPGPEDLAAI VYTSGTTGKP KGVMLSHANV VADVKAVLER IAPTPQDVFL SFLPLSHTFE
RTGGYYLPMA SGSCVVYARS VAQLAEDLKN VRPTVLVSVP RIYERVHAKL IETLSPSPLK
MQLFQAAQAV GWKRFCAAQR LPAPQDDGAG GWMRALPWPL LRALVAKPLL AQFGGRVRVA
VSGGAPLSPT IAHCFLGLGL QLVQGYGMTE TTPVVSVNTL EDNDPSTVGR ALPGVEVRIG
ENRELQVRGP IVMKGYWKRP EDTARTVSAD GWLGTGDQAE IVDGRIRILG RIKEIIVTST
GEKVPPADLE LAITADALFE QAFVVGEQRP FIACVAVVHA EEWRQLAGQL GLDANDPASL
AHPSAQRAAL ARIEKLAAGF PRYAVPRAVH LVREPWTIEN AFMTPTLKLK RTNLMAHYAA
AIEAMYQKR
|
|---|
| |