Gene Dtpsy_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1838 
Symbol 
ID7382605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand- 
Start bp1956608 
End bp1957273 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content65% 
IMG OID643655155 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002553295 
Protein GI222111031 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.834516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCCG CCCTCCCCCC AGTCCCCGAA TCGTCCGAAC CCCCGCGCCG TGGCCGCCGC 
AAGGAAGCCC GGCCCGGTGA ATTGCTGGAC GCTGCCCTGG ACCTGTTCGT GGAAAAAGGG 
TTTGCCGCCA CCCGGGTGGA CGAGGTCGCC GCGCGCGCGG GCGTGTCCAA GGGCACGCTG 
TTCCTCTACT TCCCCAGCAA GGAAGACCTT TTCAAGGCCG TGGTGCGCAA GAACATTGCG 
GGCCGCTTCC CTGAATGGGA CCTGGAGATG GAAACCTTCG AGGGCACGAG CAGCGAACTG 
GTGCAGTACT GCTTTCAGAC GTGGTGGGAG CGCGTGGGCT CCACCAAGGC ATCGGGCCTG 
GGCAAGCTCA TGCTGAGCGA GGCCAACAAC TTCCCGGAGA TCGCTGAGTT CTACCGCCGG 
GAGGTCGTGG AACCCGGCCA CCGCCTGATC CGCCGCATCC TGCAGCGCGG CATGGACCGT 
GGCGAGTTCC GCACGCTGGA TCTGGACCAT GCTGTCTATC TGGTACTGGC GCCCTTGATG 
TTCCTGATGT TCTCGCAGCC TTCGCTGTCG CTGTGCATCC CGAACCCTGA CACGTTCTCC 
GCGCAGGAAT ACATCCGCCT GCAGGCCGAG AACGTCTTGC AGGGGCTGTG CGTGCGGCCG 
ACCTAG
 
Protein sequence
MAAALPPVPE SSEPPRRGRR KEARPGELLD AALDLFVEKG FAATRVDEVA ARAGVSKGTL 
FLYFPSKEDL FKAVVRKNIA GRFPEWDLEM ETFEGTSSEL VQYCFQTWWE RVGSTKASGL 
GKLMLSEANN FPEIAEFYRR EVVEPGHRLI RRILQRGMDR GEFRTLDLDH AVYLVLAPLM 
FLMFSQPSLS LCIPNPDTFS AQEYIRLQAE NVLQGLCVRP T