Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1827 |
Symbol | |
ID | 7382594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 1944105 |
End bp | 1945043 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643655144 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_002553284 |
Protein GI | 222111020 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.297612 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCAC CACACACGAG CGCTGAGGCC CTCTCCCCCC ACGCGCCCGC CTGGGTGGGC GAGTTCGTGC TGCTGTCCAG CCTGTGGGGG GCGTCGTTCC TCTTCATGCG CCTGGGCGCG GCCGAGTTCG GCCCGCTGCC CATGGCCGGG CTGCGCGTGC TGATGGCGGC CCTGTTCCTC TGGCCCTTCC TGCTGCACCG GGGCGAATGG CCCGCGCTGC GGCGCCACTG GCGGCCCGTG CTGTTCGCCG GGCTCATCAA CTCGGCGATC CCGTTCGCGC TGTTCGCCTG GGCGGTGATG CACATCGCCA CCGGGCTGAC ATCGATTCTT AATGCCACGG TGCCGCTGTT CGGCGCGCTG GTGGCCTGGC TGTGGCTGGG CGACCGCATC AGCCGGCTGC GCTGGGCGGG GCTGGCGCTG GGCTTCGTCG GCGTGGCGCT GCTGGCCTGG CGCGCACCGG CTGGCGTGGG CGCCAGCGGC AGCCAGGTGG GCTGGGCCAT TGCGGCGTGC CTGCTGGCGT CCACCTGCTA TGCGGTGGCC GCCAGTTACG CACGGCGCTA CCTGGTGGGC ATTCCGCCAC TGGCCACGGC CACGGGCAGC CAGGTGGGCG CGGCGCTCGG GCTGGCCCTG CCCATGTGGT GGGCCTGGCC CGCGCAGACG CCGAGCCTGC GCGCCTGGGC GGCCATCGCC GCCATTGCCG TGCTGTGCAC GGGCATTGCG TACATCCTCT ACTTCCGCCT GATTGCCAAT GCCGGCCCCA GCCGGGCGCT GGCCGTGACT TTCCTGGCGC CCGTGTTCGC AGTGTTCTAC GGCGCGGTGT TTCTGGGCGA AGCGGTCACG CCGTGGATGC TGGGCTGCGG CGTGATCATT GCGTGCGGCA CGGCGCTCTC CACGGGGTTG GTGGGCGGCG CGGTGCGGCC GGGTACAAAG GCGCCCTGA
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Protein sequence | MTAPHTSAEA LSPHAPAWVG EFVLLSSLWG ASFLFMRLGA AEFGPLPMAG LRVLMAALFL WPFLLHRGEW PALRRHWRPV LFAGLINSAI PFALFAWAVM HIATGLTSIL NATVPLFGAL VAWLWLGDRI SRLRWAGLAL GFVGVALLAW RAPAGVGASG SQVGWAIAAC LLASTCYAVA ASYARRYLVG IPPLATATGS QVGAALGLAL PMWWAWPAQT PSLRAWAAIA AIAVLCTGIA YILYFRLIAN AGPSRALAVT FLAPVFAVFY GAVFLGEAVT PWMLGCGVII ACGTALSTGL VGGAVRPGTK AP
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