Gene Dtpsy_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1798 
Symbol 
ID7382565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand+ 
Start bp1914716 
End bp1915309 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content67% 
IMG OID643655115 
ProductSMP-30/Gluconolaconase/LRE domain protein 
Protein accessionYP_002553255 
Protein GI222110991 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.138552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCCGG CCGACAACGT CGCCATCGTG GCCAACGATG GCGGCCTGCC TGCTGGCACC 
CGGCTGGCCG GCGGCCAGGT GCTGGTGGAC AAGGTGCCGC AGGCGCACAA GGTGGCGCTG 
GAAGACATCC CCGAGGGCGG CGCCGTGCGC CGCTACAACG TGGTCATCGG CTATGCCCTC 
AAGTTCATAG CGGCTGGCCT GTGCTTTTCG CCCGATGAGA AGGTGCTCTA CATCGTCGAG 
GGCCGCCACC AGCCGCATCG CGTGGTGTGG GCCTACGACG TGGGCCCGGG CGGGCGGCTG 
TCCGGCAAGC GTCTGCACAT CGACGCGGGC GGCCCGGGTG CCCTGGACGG CATCAAGTGC 
GACGAGTTCG GCAACCTCTG GTGCGGATGG GGCAGCAACG GCGCCGTGGG CGCCAACCCG 
GCGGACCTGG ATGGCGTGAT GGTCTTCAAC CCCGAAGGCA AAGCCATTGG TCACATCCGG 
CTGCCTGAGC GTTGTGCCAA CCTGTGTTTT GGGGGTGCCA AGAACAACCG CCTGTTCATG 
GCCAGCAGCC ATTCGATCTA CGCGCTTTAC GTGGAGGCGC GCGGCGCTGT CTGA
 
Protein sequence
MHPADNVAIV ANDGGLPAGT RLAGGQVLVD KVPQAHKVAL EDIPEGGAVR RYNVVIGYAL 
KFIAAGLCFS PDEKVLYIVE GRHQPHRVVW AYDVGPGGRL SGKRLHIDAG GPGALDGIKC 
DEFGNLWCGW GSNGAVGANP ADLDGVMVFN PEGKAIGHIR LPERCANLCF GGAKNNRLFM 
ASSHSIYALY VEARGAV