| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1778 |
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| Symbol | |
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| ID | 7382545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1893079 |
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| End bp | 1894569 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643655095 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_002553235 |
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| Protein GI | 222110971 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATGA AGACATCACC CCTTTCCCTG CTCAAGGATC CGAGCCTGCT CAAGACCGAC
GCCCTACTGG GAGGCCAGTG GTTCGCAGGC GGCGCACGCT TTGCCGTGCA CGACCCGGCC
ACCGGCCTGA AGTTGGCCGA TGTGGCCAAC CTGGGGGCCA AGGAAGCCGA GCTGGCTATC
GCCGCCGCCA ACGAAGCGTG GCCCGCATGG AAGGCCAAGA CCGCCAAGGA GCGCAGCACC
ATCCTGCGCC AGTGGTTTGA CCTGCTCATG CAGCACCAGG ACGACCTGGG CCGGCTCATG
ACGGCGGAGC AAGGCAAGCC CTTGCCCGAG GCCAAGGGCG AGGTGGCCTA TGGCGCCAGC
TTCGTCGAGT GGTTTGCCGA GGAGGCCAAG CGCGTGAACG GCGAGACCCT GCCGCAGTTC
GACAACAACC GCCGCCTGTT GGTGCTCAAG CAGCCCATCG GCGTGTGCGC GGCCATCACG
CCGTGGAACT TCCCCTTGGC GATGATCACG CGCAAGGTGG CGCCGGCGCT CGCGGCGGGC
TGTCCGGTGG TCATCAAGCC GGCCGAGCTC ACCCCCCTCA CCGCCCTCGC CGCGGCCGAG
CTGGCGTTGC GCGCGGGCAT TCCCGCAGGC GTGCTGAGCG TGCTGACGGC CGATGCGGAG
AACTCCATCG CCATCGGCAA GGTGCTGTGC GCAAGCGACG TCGTGCGCCA CCTGTCGTTC
ACCGGCTCGA CGGAGGTCGG GCGCATCCTC ATGGCCCAGT GCGCGCCCAC GGTGAAGAAG
CTGAGCCTGG AGCTGGGCGG CAATGCGCCG TTCATCGTGT TCGACGATGC CGACCTCGAT
TCCGCCGTGG AAGGCGCCTT TGCCAGCAAA TACCGCAATG CCGGGCAGAC CTGCGTGTGC
ACCAACCGCT TCTACGTGCA GGCGGGGGTG TACGACGCCT TCGTCGCCAA GTTTGCCGCC
CGCGTAAAAA CCGCGAAGGT CGGCAATGGC TTCGAGGACG GCGTGAACCA GGGCCCGTTG
ATCGAATCCG CCGCGGTGGA CAAGGTGCAG CGCCACCTGG ACGACGCCGT CGCCAAGGGC
GCCAGCGTCG TGACGGGCGG AAAGCACCTG GCGGAACTGG GCGCGGGCCA GTTCTTTGAA
CCCACGGTGC TGGCCAACGC CACCGCTGGA ATGCTGTGCG CGCGCGAGGA AACCTTCGGC
CCGCTGGCGC CGGTCTTCAG GTTCGAGACC GAGCAGGAAG CCATCGCTGC CGCCAACGCC
ACCGAGTTCG GCCTGGCCAG CTACTTCTAC AGCCGCGACG TGGGCCGCAT CTTCCGAGTG
GGCGAGGCGC TGGAATATGG CATGGTGGGT GTGAACGTCG GCATTCTGGC GACCGAGCAT
GTGCCCTTCG GCGGCGTTAA GCAGTCGGGC CTGGGGCGCG AGGGATCCCA CTACGGCATG
GACGACTATG TGGAGATCAA ATACCTCTGC GTGGGCGATA TCCAGAAGTA G
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| Protein sequence | MDMKTSPLSL LKDPSLLKTD ALLGGQWFAG GARFAVHDPA TGLKLADVAN LGAKEAELAI
AAANEAWPAW KAKTAKERST ILRQWFDLLM QHQDDLGRLM TAEQGKPLPE AKGEVAYGAS
FVEWFAEEAK RVNGETLPQF DNNRRLLVLK QPIGVCAAIT PWNFPLAMIT RKVAPALAAG
CPVVIKPAEL TPLTALAAAE LALRAGIPAG VLSVLTADAE NSIAIGKVLC ASDVVRHLSF
TGSTEVGRIL MAQCAPTVKK LSLELGGNAP FIVFDDADLD SAVEGAFASK YRNAGQTCVC
TNRFYVQAGV YDAFVAKFAA RVKTAKVGNG FEDGVNQGPL IESAAVDKVQ RHLDDAVAKG
ASVVTGGKHL AELGAGQFFE PTVLANATAG MLCAREETFG PLAPVFRFET EQEAIAAANA
TEFGLASYFY SRDVGRIFRV GEALEYGMVG VNVGILATEH VPFGGVKQSG LGREGSHYGM
DDYVEIKYLC VGDIQK
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