| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1744 |
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| Symbol | |
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| ID | 7385308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1852137 |
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| End bp | 1853108 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643655060 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_002553201 |
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| Protein GI | 222110937 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCTGA CCAAACTTGC GCTGGGCCTG GGCTTGGCAC TGGGCATGGC CGCAACGGCC
TTGGCACAAA CCACAATGCG CATCAGCATC TCGACGGCGC AGAACTCCCA CCAGGGCGTC
GCCATCGACA AGTTTGCCAA GGAGGTCGAG AAGCGCACCG GCGGGCGCTA CAAGGTGCAG
ACCTTCTACA ACGGCGCGCT GGGCGGCGAG CGCGAATCCA TCGAGGCGGT GCAGTTGGGC
ACACAGGAGT TGGCCTTCAG CTCCACCGGT CCGGTGCCCA ACTTCGTGCC CGAGACCAAG
ATCCTGGACG TGCCCTTCCT GTTCCGTGAC AAGGCCCACG CCCGCGCCGT GCTCGACGGC
CCGATCGGCC AGGACCTGCT GACCAAGTTC GATGCCAAGG GCTTCAAGGC GCTGGCCTGG
GCGGAGAATG GCTTTCGCCA CATGACCAAC AGCAAGCGCG ACGTGAAGAC GCCTGAGGAC
TTGAAGGGCC TGAAGATGCG CACCATGGAG AACCCGGTGC ACATCGCCGC GTACAAGGGC
TTCGGCATCA TCACCACGCC CATGGCCTTC CCCGAAGTGT TCACCGCCCT GCAACAAGGC
ACGGTGGACG GCCAGGAAAA CCCCCTGCCC GTGATCATCT CGGCCAAGTT CGACCAGGTA
CAAAAGCACC TCTCGCTGAC GGGTCACGTG TACTCACCCT GCCTCTTCGT GATGAACAAG
GCGGTGTTCG ACAAGCTCTC CCCTGCGGAC AAGCAGGCCT TCATCGACGC CGCCAAGGAG
GGCACCAAGG CCAACCGCGC TCGCGTGGAC GAGGACGACG CCAAGGGCGT GGCCGACCTG
CGCGCCAAGG GCATGACGGT GATCGACGAT CTGGACAAGT CCAAGTTTGT CGCCGCGCTC
GCGCCCGTGA ACGCGCAGTT CGAGAAAGAG TTCGGTAAGG CCAACCTCGA CAAGATCCGC
AACTACAAGT GA
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| Protein sequence | MQLTKLALGL GLALGMAATA LAQTTMRISI STAQNSHQGV AIDKFAKEVE KRTGGRYKVQ
TFYNGALGGE RESIEAVQLG TQELAFSSTG PVPNFVPETK ILDVPFLFRD KAHARAVLDG
PIGQDLLTKF DAKGFKALAW AENGFRHMTN SKRDVKTPED LKGLKMRTME NPVHIAAYKG
FGIITTPMAF PEVFTALQQG TVDGQENPLP VIISAKFDQV QKHLSLTGHV YSPCLFVMNK
AVFDKLSPAD KQAFIDAAKE GTKANRARVD EDDAKGVADL RAKGMTVIDD LDKSKFVAAL
APVNAQFEKE FGKANLDKIR NYK
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