| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1742 |
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| Symbol | |
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| ID | 7385306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1850205 |
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| End bp | 1851482 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643655058 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_002553199 |
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| Protein GI | 222110935 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGG TCATGATCTC CACCATGGTG CTGTGCTTCG CGCTCACCAT CTCCGTGGCC
GTCTCCATCG GGCTGGCCTC CATCCTGGGC ATCCAGGTGG CGAACGCCAA CATGCTGATC
TCCGTGAAGG AGATGTTCGC CTCCATCAAC AAGTTTCCGC TCGCAGCCAT TCCGTTCTTC
ATCCTGGCGG GCAACCTCAT GGAGACCGGC GGTATTTCGC GCCGGCTCGT GGAGTTTGCC
AAGAGCATCG TGGGCGGCGT GCAGGGCGGC CTGCCCATGA CCTGCGTGCT CACCTGCATG
ATCTTCGCGG CCGTCTCAGG GTCATCGGTG GCGACCACGT TCGCCATCGG CGCCATCCTG
ATTCCTGCGC TCATCAAGCA TGGCTACCCC ACCAGCTACG CGGCCGCGCT GCAAGCCACC
AGTGCCGAGC TGGGTGTGAT CATCCCGCCG TCCATCCCCA TGATCCTGTA CGGTGTGGCG
GCCGAGGTGT CGATTGGCGA GCTGTTCATC GCCGGCTTCG GCCCCGGCAT CCTCATCAGC
GGTGCGCTGA TGTTGTTCGT CTGGGCGTAT TGCAAGTACA AGGGCTGGGG CAAGCATGAC
GGCGACGGGC GCATGCCCTT CGGCCGCGCG CTGCTGCAGG CGGGCTGGGC ACTGCTGATG
CCAGTCATCA TCCTGGGCGG CATCTACGGC GGCGTGTTCA CGCCCACCGA GGCCTCTGCC
GTGGCCGTGT TCTACGCGCT GGTGGTGGGC ATGCTGATCT ACCGCGAGAT CCGCGTCGCG
GACCTGTTCG CCATCCTGCG CAAGTCGGCC ATCTCGTCGG CAGTGATCAT GTTCATCATT
GCCAATGCGG GCCTGTTTGC CTTCCTCATC ACGCGCGCTG GCGTGCCGGA CGCCATCGGC
CGCTGGCTGC AGGAGGTACT GCAGTCGCCC GCGCTGTTCC TGCTGGGCGT GAATGCCGCG
CTGTTCGTGA TCGGCATGTT CATCGAGACC AGCGCCGCCA TCATCGTGCT GGCGCCGATC
CTGGCGCCGG TGGCCCAGCA CTTCGGCGTG GACCCGGTGC ACTTCGGGCT GATCATGGTG
GTGAACCTGG CGCTCGGCAT GATCACGCCA CCCTTCGGCG TGAACCTGTT CGCGGCGTGC
ACGGTGGCGC GCATCTCCCT GGATCGTATC GTCGCCCACC TGTTGCCGTT CGTGGGCGTG
GTCCTGCTGT GCCTCCTGGT CATCACCTAC GTGCCATCGC TTTCACTGGC CCTGCGTGAT
CTCGTGTACG CAAAATAA
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| Protein sequence | MTTVMISTMV LCFALTISVA VSIGLASILG IQVANANMLI SVKEMFASIN KFPLAAIPFF
ILAGNLMETG GISRRLVEFA KSIVGGVQGG LPMTCVLTCM IFAAVSGSSV ATTFAIGAIL
IPALIKHGYP TSYAAALQAT SAELGVIIPP SIPMILYGVA AEVSIGELFI AGFGPGILIS
GALMLFVWAY CKYKGWGKHD GDGRMPFGRA LLQAGWALLM PVIILGGIYG GVFTPTEASA
VAVFYALVVG MLIYREIRVA DLFAILRKSA ISSAVIMFII ANAGLFAFLI TRAGVPDAIG
RWLQEVLQSP ALFLLGVNAA LFVIGMFIET SAAIIVLAPI LAPVAQHFGV DPVHFGLIMV
VNLALGMITP PFGVNLFAAC TVARISLDRI VAHLLPFVGV VLLCLLVITY VPSLSLALRD
LVYAK
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