Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1688 |
Symbol | |
ID | 7385252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 1789398 |
End bp | 1790798 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643655004 |
Product | lytic murein transglycosylase |
Protein accession | YP_002553145 |
Protein GI | 222110881 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTTC TCTTCATGCC CGACACCCTC GCCCGGCGCC GCGCCGCCGC CTCCGCACTG GGCGTGGCAG CACTGGCGGG GTGCGCCTCC GCTCCGCCAG CGACCCCCGC CGTAGCGGCT CCATCCGCTG CACCCAGCGC CCCTGCGCCC GCGCCGGTTA TCCCCCAACT GCCGTCGCCC GCAGCGCCCA CCACCCCGGC GCCTGCCCCG GCAACATCCA CCGTGGAACC TGCGAGCACG CCGGTCGCGC CGCCGGCGCC CGACACCACC GCAACCACGC TGGCCGGCTT CCACGCCTGG GTGAGCGCCT TTGCACGCGA GGCGCTGGCC GCCGGCATCC GCCCGCAGAC CGTGGCCGCC ACCCTGGGCC AGGCGCAGTG GCAACCGCGC GTGGTGGAAC TGGACCGCGC CCAGCCCGAA TTCACCCGCC CGCCCTGGGC CTACCTGGAC AGCGCAGTGT CATCCCAGCG CATTGCGCAG GGACGCGAGC AGCGGCACCA GTACGCCGAC GCGCTGGACG CGGCAGCGCA GCGCTACGGC GTGCCCGCCA GCGTGGTCAC GGCCATCTGG GGCATGGAGA GCAACTATGG CCGCAACTTC GGCAGCTTCC GCACCGTGGA TGCGCTGGCG ACCCTCGCCT ACGACGGGCG CCGCAGCGCA TGGGCCCAGC GGGAGCTGCT GGCCGCGTTG CGCATCGTGG ACCAGGGCGA CATCGCGGCC GACGCGCTCA TCGGCTCCTG GGCCGGAGCC ATGGGGCACA CGCAGTTTCT GCCCTCGGTG TTCCTTGCCC ATGCGGTGGA TGCCGACGGG GACGGGCGGC GCGATATCTG GGGCAGCGTG CCCGACGTGG TGGCGTCCAC GGCCAACTTC CTGGCCCATT CGGGCTGGAA GAGCGGTGAG CCGTGGGGCG CCGAAGTGCT GCTGCCGCCC GGCTTCGACT ACGCACGCGC CGAACTGAGC GTGCGCCAAG CCAGCAGCGA CTGGGCCGCT GAAGGGGTGC GCGGCGTGGG TGACGCGGAG CTGCCGCCGC TGCAGGACGC CTCCGTCCTT ACCCCGGCAG GCGCGCGTGG ACCCGCCATC CTGGTCGGGC CCAACTTCCG CGCGCTGCTG CGCTACAACA ACTCGGTGAA CTACGCCCTG GCCGTGGGCC TGCTGGCACG GCAGATCGAC GGCGGCGCGG GCCTGGCATC CGCCTGGCCG CGCGAACTGC AGCCTCTGTC GCGCAGCGAA GTACGCGCGC TGCAGGAGGC GCTGAATGCA CGCGGCCTGG ACACCGGCAC GCCCGACGGC GTGGCAGGAC CCGCCACGCG CGCTGGGGTG CGCCGCTACC AGCAAAGTGT GGGCTTGCCC GCCGATGGCT ATGCCACGCG CGAACTATTG CAGCGACTGC TGACGCCCTG A
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Protein sequence | MRFLFMPDTL ARRRAAASAL GVAALAGCAS APPATPAVAA PSAAPSAPAP APVIPQLPSP AAPTTPAPAP ATSTVEPAST PVAPPAPDTT ATTLAGFHAW VSAFAREALA AGIRPQTVAA TLGQAQWQPR VVELDRAQPE FTRPPWAYLD SAVSSQRIAQ GREQRHQYAD ALDAAAQRYG VPASVVTAIW GMESNYGRNF GSFRTVDALA TLAYDGRRSA WAQRELLAAL RIVDQGDIAA DALIGSWAGA MGHTQFLPSV FLAHAVDADG DGRRDIWGSV PDVVASTANF LAHSGWKSGE PWGAEVLLPP GFDYARAELS VRQASSDWAA EGVRGVGDAE LPPLQDASVL TPAGARGPAI LVGPNFRALL RYNNSVNYAL AVGLLARQID GGAGLASAWP RELQPLSRSE VRALQEALNA RGLDTGTPDG VAGPATRAGV RRYQQSVGLP ADGYATRELL QRLLTP
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