| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1681 |
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| Symbol | |
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| ID | 7385245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1781948 |
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| End bp | 1783666 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643654998 |
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| Product | poly(R)-hydroxyalkanoic acid synthase, class I |
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| Protein accession | YP_002553139 |
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| Protein GI | 222110875 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.82059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGA ATTTCGACGC CAGCTGGGCC GACAGCGCCC GGCAGTTTCA GCAGATGGTG
GGCGAGGGCT GGAGCCAGAT GCTGCAGGTC CTGCAGCCCA AAGAAATGGG CGCCGCGCTG
TCCATGCCAG CTGCCGGCCC GGTGGGCTTC GCACCCGACA AGCTGGCTGC GGTGCAGCAG
CGGTACCTGC AAGAGGTGCA GGCGCTGTGG AGCCACGCGC TGCATCACGA CGATGCACCC
CTCAGCAACG ACCGCCGGTT CGCGGGCGAG AATTGGGCGC ACAACCCGTT GTCGGCGTTC
TCGGTCGCGG CCTACCAGTT GCAGGCGCAT GCGCTCATGG GCCTGGCCGA CGCGGTGCAG
GCCGACGACA AGACCCGTGC ACGCATCCGC TTCAGCGTGG AGCAATGGCT GGCCGCCATG
GCGCCCAGCA ACTTCCTGGT ATTCAACGCG GACGCGCAGC AAAAAGCCCT GGAAACGCAC
GGCGAGAGCA TCGCCAAGGG CGTCGCCAAC CTGCTGCACG ACCTGGGCCA GGGGCATATC
TCGATGACCG ACGAGAGCCG CTTCGAAGTG GGCCGCAACG TGGCCACTAC CGAGGGCGCC
GTTGTGTTCG AGAACGAGCT GTTTCAGCTG CTGGAATACA AGCCGCTCAC CCCCAAGGTG
TACGAGCGGC CCTTGCTTAT GGTGCCGCCG TGCATCAACA AGTACTACAT CCTGGACCTG
CAGCCCGACA ACTCGCTGAT CCGCCATGCC GTGGCCCAGG GCCACCGCAC CTTCGTGGTG
AGCTGGCGCA ACCCCGATGC GTCGCTGGCG CACAAGACCT GGGACGACTA CATCGACGAG
GCCGTGCTCA CGGCCATCGC CACCGTGCAG CAGATCGCTG GCGCCAAGCA GATCAACGCC
CTGGGCTTTT GCGTGGGCGG CACCATGCTG GCCACGGCGC TCGCGGTGCT GGCGGCGCGC
GGCGAGGAGC CTGTGGCCAG CTGCACTTTC CTGACCACGC TGATCGATTT TGCCGACACC
GGGATCCTCG ACGTGTTCAT CGACGAAGGC TTCGTGCGCA TGCGCGAACT GCAGATGGGG
CAGGGCGGGC TCATGAAGGG CCAGGACCTG GCATCCACCT TCAGCTTTCT GCGCCCGAAC
GACCTGGTGT GGAACTACGT GGTGGGCAAC TACCTCAAGG GCGAGACGCC GCCGCCCTTC
GACCTGCTGT ACTGGAACAG TGACAGCACC AACCTGCCTG GGCCGTACTA CGCCTGGTAC
CTGCGCAACT TCTACCTGGA GAACAACCTC ATCCGGCCGG GGCGGCTCAC CGTGTGCGGC
GAGTCACTCG ACCTGACCCA GGTCCAACTG CCTGTGTACA TCTACGGCTC GCGCGAGGAT
CACATCGTGC CAATCGGCGC GGCCTACGCC TCCACGCAGG TATTGCCGGG GGACAAGCGT
TTCGTGATGG GCGCGTCGGG CCATATCGCG GGGGTCATCA ACCCGCCCGC CAAGAAAAAG
CGCAGCCACT GGCTGCGCGA GGATGGGCAA CTGCCCGCCA CGCTGGATGC GTGGCTGGCT
GGGGCCACCG AACTGCCCGG CAGTTGGTGG GACGACTGGT GCGCATGGCT GCACGGCCAC
GCCGGTCGGC AGATCGCCGC ACCCAAGGCC TATGGAAAGG CGCCGAAGTT CAAGGCCATC
GAACCCGCGC CAGGGCGCTA CGTGCAGCAA AAGGCCTGA
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| Protein sequence | MSTNFDASWA DSARQFQQMV GEGWSQMLQV LQPKEMGAAL SMPAAGPVGF APDKLAAVQQ
RYLQEVQALW SHALHHDDAP LSNDRRFAGE NWAHNPLSAF SVAAYQLQAH ALMGLADAVQ
ADDKTRARIR FSVEQWLAAM APSNFLVFNA DAQQKALETH GESIAKGVAN LLHDLGQGHI
SMTDESRFEV GRNVATTEGA VVFENELFQL LEYKPLTPKV YERPLLMVPP CINKYYILDL
QPDNSLIRHA VAQGHRTFVV SWRNPDASLA HKTWDDYIDE AVLTAIATVQ QIAGAKQINA
LGFCVGGTML ATALAVLAAR GEEPVASCTF LTTLIDFADT GILDVFIDEG FVRMRELQMG
QGGLMKGQDL ASTFSFLRPN DLVWNYVVGN YLKGETPPPF DLLYWNSDST NLPGPYYAWY
LRNFYLENNL IRPGRLTVCG ESLDLTQVQL PVYIYGSRED HIVPIGAAYA STQVLPGDKR
FVMGASGHIA GVINPPAKKK RSHWLREDGQ LPATLDAWLA GATELPGSWW DDWCAWLHGH
AGRQIAAPKA YGKAPKFKAI EPAPGRYVQQ KA
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