| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1656 |
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| Symbol | |
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| ID | 7384730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1746002 |
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| End bp | 1748548 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643654973 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002553114 |
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| Protein GI | 222110850 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.695439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTCTC CTGTCGCGCC CTCTTCCACC GTGTCTGCCG TTAAAACCCC GGCGCGCTGG
TGGCGTGCCT GGTGGCGCAG CCTCTCGCCC ACGCGCCAGG ACCGGTTCGC GGCGCTGGCG
CCCGTGGCAT CGGTGCTGAT GTTCCTCGCT GCCATCGTGG CCTCGTTCTG GTATTTGCGC
ACGGAAGAGG TGGAACGCGA GAAGGAAGCC CTCAGGCGCG ACGTGGAATA CGCCCAGCAG
CGCGTGCGTT TGCGCTTGCT GGAGCGGCAA GAGCAGATCA TGCGCATCGC GCGCGATCTA
TCCAACCAGG ATGTGGAGCG CGCGGACTTC GGCAGCCGCG CCGAGCCGCT CATCAGCCAG
TACCCCGAGC TGCAGGCCAT CACCTGGATT GACGAGCGCC GGCGTATCCG CGCCAGCCAC
GCCGCGCCCG CCGTGACCAG CAGCCAGCTG CGCGTGGGCG GCGAGGTGCT CAAGCCCGGC
GAGACCACCA ACCTCTTCAA CGCCGTCCGC GACCTGCAGC AGCCGCTGTA TTCGCAACCC
ACGGCCACCG AGGGCGAGAG CGCTCCCCTG CTGCAACTGC AGGTGCCCCT GTCGCCCCAG
GGCAAGTTCG GCGGCGTGGT GCTGGCGGAA TACTCCATCG ACAGCCTGCT GCGCTACGGC
ACTCCCACGG AGGTGCTGGC GCGCTACGCC GTCACGTTGC TGGACGGCAA TGGCCGCACC
TTGGCGGGCA CGCCCCTGCC CCCGCGCACC AATGCGCTGC TGCCCTGGAC CACCAAGGCC
AACCAGTACG AGATCCCGGT CTCCCCGGTG GGCAACGGCC TCGTGATGCG GGCGCAGGCG
TACCGTACGT CGCTGGGCGT GGTGGGCAGC GGGCTGTTCT GGCTCGTGGG CACGCTCAGC
GTGATGACGG CATGGATGCT CATCGCCACC TGGCGGCACA CGCGCAGGCG GCTGCAGGCC
CAGGAAGCAC TGGTGGCAGA AACCAACTTC CGCCGGGCGA TGGAGAACTC CATCCTCACC
GGCATGCGCG CGCTGGACCT GGAGGGCCGC ATCACCTATG TGAACGCCGC GTTCTGCCAG
ATGACAGGCT GGACCGAGGC CGAGCTGGTC GGGCAGACCC CGCCCTACAG CTACTGGCCC
GAGGGCGAAT ATGAGTCGCT GCACGCCAAT CTGCGGGACG AACTCTCGGG CAAGACCGTG
CCCGGTGGAT TCCAGGTACG CGTGCGGCGC AAGAGCGGCA CGCTGTTCGA TGCACGCCTG
TACGTCTCAC CGCTGATCGA CGCACGCGGT CACCAGACAG GCTGGATGAC CTCGATGACC
GATATCACCG AGCCCAACCG CGTGCGCGAG CAACTCACCG CCTCGCATGA GCGCTTCACC
ATCGTGCTGG AGGCGCTGGA CGCCTCCGTC TCCGTGGCGC CGCTGGGGAG CGAGGAGCTG
CTGTTTGCCA ACCGCCTGTA CCGCCAATGG TTCGGCTCGC AGACCAGCGG CCACCTACAA
CTGGTGGCGC AGGCGGGCGT GCTGCCCACC TCCTACAGTT CCGGCGGCAT GGACGACGAA
GATGGCCTGA TGGGCCTGCC CACCGACTCG CTGACCAGCG CCCGTTCGGA GAACGCCGAG
ATCTACCTGC CCGATCTGGG CAAGTGGCTG GAGGTGCGCT CGCGCTACCT GAACTGGGTG
GACGGCCGTT TGGCGCAAAT GGTCATTGCC ACCGACATCA CGCCGCGCCG CCAGGCCGAG
GAGCAGGCCG CGCGCCAGGC CGAACGCGCC CAGTCGGTCA GCCGCCTCAT CACCATGGGC
GAGATGGCCT CCAGCGTGGC CCACGAACTC AACCAGCCGC TCACCGCCAT CAGCAACTAT
TGCAGCGGCA TGGTCTCGCG CATCCAGGGC GGCCAGATCA GCGAGGAGGC ACTGCTCACG
GCGCTGCAAA AGACCGCCCA CCAGGCGCAG CGCGCCGGCC AGATCATCCA GCGCATCCGC
GCCTTCGTGA AAAAAAGCGA ACCCAACCGC ACGCTGGCCG ACGTGCACGA GATGGTGAGC
GAAGCGGTGG AACTGGCCGA CATCGAGCTG CGGCGCCACA ACGTGCACCT GACGCACTAC
GTCGCCGCCC GGCTGCCCCA GGTGATGGCC GACACGATCC TGATCGAGCA GGTGCTCATC
AACCTGATGA AGAACGGCGC CGAGTCCATC GCCCAGGCCC ACCGCCCCCC ATCCGGGCGC
AGCGTGGAGC TGCGCGTGGT GCCGCGCCAT GTGGATGGCC GCGGGGTGAT CGAGTTTTCG
GTGCAGGACA CGGGCAAGGG CCTGGCCCCG GAAGTGCTGG CGCACCTGTT CGAGGCATTC
TTCTCCACCA AGAGCGAAGG CATGGGCATG GGCCTGAACC TGTGCCGCAG CATCGTCGAG
TCGCACCAGG GCCGGATGCA CGCGGAGAAC CTCTACAATG GATCGGAGGT CACCGGCTGC
CGGTTCTCCT TCTGGCTTCC GCTCGCCACT GCTGCGGATG CCACTATCAA TTCCGCAGCA
ACGTCAACCC CAAGGACTAT TGCATGA
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| Protein sequence | MESPVAPSST VSAVKTPARW WRAWWRSLSP TRQDRFAALA PVASVLMFLA AIVASFWYLR
TEEVEREKEA LRRDVEYAQQ RVRLRLLERQ EQIMRIARDL SNQDVERADF GSRAEPLISQ
YPELQAITWI DERRRIRASH AAPAVTSSQL RVGGEVLKPG ETTNLFNAVR DLQQPLYSQP
TATEGESAPL LQLQVPLSPQ GKFGGVVLAE YSIDSLLRYG TPTEVLARYA VTLLDGNGRT
LAGTPLPPRT NALLPWTTKA NQYEIPVSPV GNGLVMRAQA YRTSLGVVGS GLFWLVGTLS
VMTAWMLIAT WRHTRRRLQA QEALVAETNF RRAMENSILT GMRALDLEGR ITYVNAAFCQ
MTGWTEAELV GQTPPYSYWP EGEYESLHAN LRDELSGKTV PGGFQVRVRR KSGTLFDARL
YVSPLIDARG HQTGWMTSMT DITEPNRVRE QLTASHERFT IVLEALDASV SVAPLGSEEL
LFANRLYRQW FGSQTSGHLQ LVAQAGVLPT SYSSGGMDDE DGLMGLPTDS LTSARSENAE
IYLPDLGKWL EVRSRYLNWV DGRLAQMVIA TDITPRRQAE EQAARQAERA QSVSRLITMG
EMASSVAHEL NQPLTAISNY CSGMVSRIQG GQISEEALLT ALQKTAHQAQ RAGQIIQRIR
AFVKKSEPNR TLADVHEMVS EAVELADIEL RRHNVHLTHY VAARLPQVMA DTILIEQVLI
NLMKNGAESI AQAHRPPSGR SVELRVVPRH VDGRGVIEFS VQDTGKGLAP EVLAHLFEAF
FSTKSEGMGM GLNLCRSIVE SHQGRMHAEN LYNGSEVTGC RFSFWLPLAT AADATINSAA
TSTPRTIA
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