| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1646 |
|---|
| Symbol | |
|---|
| ID | 7384720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 1737333 |
|---|
| End bp | 1738448 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643654963 |
|---|
| Product | 2-hydroxyglutarate dehydrogenase |
|---|
| Protein accession | YP_002553104 |
|---|
| Protein GI | 222110840 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0579] Predicted dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.515375 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGA TGGTCGATTG CGTCGTGGTG GGCGCGGGGG TGGTGGGGCT GGCGGTGGCG
CGCGCATTGG CGCTGCAAGG GCGCGAGGTC TGGCTGCTGG AAGCGGCCAA TGCCATTGGC
ACCGAGACGA GTTCGCGCAA CAGCGAGGTG ATCCACGCCG GCATCTATTA CCCGCAGGGT
TCGCTCAAGG CGCGCTTGTG CGTCCAAGGC AAGGCCATGC TGTACGACTA CTGCAGCGAG
CGCGGCGTGC CCCATAGTCG CTGCGGCAAG CTCATCGTCG CCACGTCGAC CGAACAGCAG
AACGCGCTGA CGGGCATCAG AGCGCGCGCG CAGGCCAATG GCGTGGATGA CCTGCAATGG
CTCTCGCGGG AGGAAGCACG TGCGCTGGAG CCCGAACTGG AATGTGTGGC AGCGCTGCTC
TCGCCCAGTA CCGGCATCGT GGACAGCCAT GCCCTCATGC TGGCGTTGCT GGGCGACCTG
GAGAACGCGG GTGGTGTTCT GGCATTGAAT TCGCCTCTGG CCAAGGCCCA TTGCGCGCCA
CAAGCTATCC ATTTGGAAGC AATGGATGGC ACGTGCATCA GTGCGCGCAC GGTGGTCAAC
GCGGCCGGTT TGCATGCGCC AGTCCTCGCG CGCCAATTCG AGGGGTTGTC CGCGGTGCAT
GTACCGCAGG CGGCCTATGC CAAAGGCAAC TATTTCACGT TGTCCGGCCG GGCACCCTTC
AGCCATCTCA TCTATCCCGT CCCGGAGGCG GCGGGGCTGG GCGTGCACCT GACGCTCGAC
CTGGGGGGGC AGGCCAAGTT CGGCCCCGAC GTGCAATGGG TGGAAGGCCC CGAGGACCTG
GTGGTGGATG CGAGCCGCTC CGAGGCCTTT TATGCCGAGG TGCGCAAGTA CTGGCCCGGC
CTGCGCGACG GTGCATTGGC GGCGGGCTAC GCCGGCATAC GCCCGAAGAT CCACGGCCCC
CATGAGCCCG CGGCGGACTT CCTGATCCAG GGGCCGCGCG ATCACGGAGT CTCGGGGCTG
GTCAACCTGT TTGGCATCGA ATCACCTGGG CTGACCAGCG CGTTGGCAAT CGGTGCGCAC
GTGGTCGGTC TGCTGCACCA AGACGCCGTG TCTTGA
|
|---|
| Protein sequence | MSEMVDCVVV GAGVVGLAVA RALALQGREV WLLEAANAIG TETSSRNSEV IHAGIYYPQG
SLKARLCVQG KAMLYDYCSE RGVPHSRCGK LIVATSTEQQ NALTGIRARA QANGVDDLQW
LSREEARALE PELECVAALL SPSTGIVDSH ALMLALLGDL ENAGGVLALN SPLAKAHCAP
QAIHLEAMDG TCISARTVVN AAGLHAPVLA RQFEGLSAVH VPQAAYAKGN YFTLSGRAPF
SHLIYPVPEA AGLGVHLTLD LGGQAKFGPD VQWVEGPEDL VVDASRSEAF YAEVRKYWPG
LRDGALAAGY AGIRPKIHGP HEPAADFLIQ GPRDHGVSGL VNLFGIESPG LTSALAIGAH
VVGLLHQDAV S
|
|---|
| |