Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1645 |
Symbol | |
ID | 7384719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1736278 |
End bp | 1737315 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643654962 |
Product | histone deacetylase superfamily |
Protein accession | YP_002553103 |
Protein GI | 222110839 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.528936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACCT TCCATAACCC GCTGCAGCAC ACCCACGCTC CCGAGCACGA ATTTTTCCGC GGCGAGCGTG TACCGTGTTT CGAGAACCCG ACGCGCGCGG CCTATGTGGA AGCCGCTTTG ACTGCGCGGG GTCATGTACT GCACCCCCCG GATGTGGATT GCGCTGAGAT CCTGGCAAAG ATCCATGCGC CGAGCTACCT GGCTTTTCTG GCTTCGGCGT GGCAGCAGTG GCTGTCGCTG GGTGAAGGGC AGGACCGTGT GCAGCCGTTT CCGTCGGTAT GGCCGGTACG CACATTGCGC TCGGATGTAG AGCCCGACAA TTTCATTGCC AAGCTGGGGC TGTACTCCAT GGACAACGGC TCGCCGCTTG CAGCGGGCAC CTGGACGGCA GCCAAAGCAG GCGCCGACGC GGCGGCCAGT GCCGCGGCGC GCCTGGCGGC TGGCGAGCGC GCCGCGTTCT GCAGCACACG CCCGCCGGGG CACCATGCAG GCCCCGATTT CATGGGCGGG TACTGCTTCT TGAACAACGC GGCCGTGGCG GCCCAATGGC TGCGCGACCA CGGCGCGGCC CGTGTGGCCG TGTTAGACGT GGATTACCAC CACGGCAATG GCACGCAGAG CATCTTCTAT GACCGTGCGG ACGTGCTCTT CGTCAGCATC CATGGCGATC CCCACACCGA ATACCCCTTC TATCTGGGAC ATGCCGATGA AACCGGCGCA GGCCTCGGTG CGGGCTGCAA CCTGAACCTG CCTCTGCCGG CCGGAACCGA TGCTGCCACT TGGTTTGCGG CCTTGGAGCA GGCCTGCGCG CGCATCGCCG CTTTTGGAGC GGATGCCCTG GTGGTCTCGC TCGGACTGGA TACCTATGAG GGCGATCCGA TCTCGCGCTT TCGGCTGGCG ACGACGGATT TTCTGCGGCT GGGTGCGCGG CTGCGTGGTG TGGGACTGCC CACCGTGCTG GTGCTGGAAG GCGGCTACGC AGCGGCGGCG CTGGGAACGA ATGCGGTGAA TGTGCTCGAG GGTTTCGAGC AGGCATGA
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Protein sequence | MITFHNPLQH THAPEHEFFR GERVPCFENP TRAAYVEAAL TARGHVLHPP DVDCAEILAK IHAPSYLAFL ASAWQQWLSL GEGQDRVQPF PSVWPVRTLR SDVEPDNFIA KLGLYSMDNG SPLAAGTWTA AKAGADAAAS AAARLAAGER AAFCSTRPPG HHAGPDFMGG YCFLNNAAVA AQWLRDHGAA RVAVLDVDYH HGNGTQSIFY DRADVLFVSI HGDPHTEYPF YLGHADETGA GLGAGCNLNL PLPAGTDAAT WFAALEQACA RIAAFGADAL VVSLGLDTYE GDPISRFRLA TTDFLRLGAR LRGVGLPTVL VLEGGYAAAA LGTNAVNVLE GFEQA
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