Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1644 |
Symbol | |
ID | 7384716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1735218 |
End bp | 1735931 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643654959 |
Product | DNA polymerase III, epsilon subunit |
Protein accession | YP_002553102 |
Protein GI | 222110838 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.264964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCGAC AGATTGTTCT GGACACGGAG ACCACCGGCC TGTCGGCGGA AGGGGGCGAC CGCATCATCG AGCTGGGCTG CGTGGAGCTC GTCAACCGCA AGCTCACCGG CAACAATCTG CATCTGTACC TGAACCCCGA GCGCGACAGC CATGAGGACG CGCTGAAGGT GCACGGCATC AGCAATGAAT TCCTGCGCGA CAAGCCCAAG TTTGCCGAGC GGGTGCAAGA CATCCTGCAA TACCTGCAGG GCGCGGAACT CATCATCCAC AACGCGAGCT TCGACGTGGG CTTCCTGGAC AAGGAGCTGG AACTGGTCGG CCTGGCGCCG CTGTCCGCGC ATGTCGGGGG CGTGATCGAC ACCCTGGCCA TGGCCAAGGA GATGTTCCCG GGCAAGCGCA ACTCGCTGGA CTCGCTGTGC GACCGGCTGG GCGTTGACAA TTCCAGTCGT ACGCTGCACG GCGCCTTGCT GGACGCGGAG TTGCTGGCGG ATGTCTACAT CAACATGACC CGCGGGCAGG ATGCCCTGCT GATCATGGAT GAGGCCACCG CCGGGGCAGG AGGCACCACC GTGGCCGCGG TAGATCTGAG CCGCATTGCG CTGACGGTGC TGACCGCCAG TGCGCAGGAG CTTGCCGAGC ATGAGGAAGT ACTCGTGCAG ATCGACAAGT CCAGCGGCGG TAAAACAATT TGGCGGACTT TGTCTGAGGC GTGA
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Protein sequence | MSRQIVLDTE TTGLSAEGGD RIIELGCVEL VNRKLTGNNL HLYLNPERDS HEDALKVHGI SNEFLRDKPK FAERVQDILQ YLQGAELIIH NASFDVGFLD KELELVGLAP LSAHVGGVID TLAMAKEMFP GKRNSLDSLC DRLGVDNSSR TLHGALLDAE LLADVYINMT RGQDALLIMD EATAGAGGTT VAAVDLSRIA LTVLTASAQE LAEHEEVLVQ IDKSSGGKTI WRTLSEA
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