Gene Dtpsy_1644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1644 
Symbol 
ID7384716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp1735218 
End bp1735931 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content63% 
IMG OID643654959 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_002553102 
Protein GI222110838 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.264964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGAC AGATTGTTCT GGACACGGAG ACCACCGGCC TGTCGGCGGA AGGGGGCGAC 
CGCATCATCG AGCTGGGCTG CGTGGAGCTC GTCAACCGCA AGCTCACCGG CAACAATCTG
CATCTGTACC TGAACCCCGA GCGCGACAGC CATGAGGACG CGCTGAAGGT GCACGGCATC
AGCAATGAAT TCCTGCGCGA CAAGCCCAAG TTTGCCGAGC GGGTGCAAGA CATCCTGCAA
TACCTGCAGG GCGCGGAACT CATCATCCAC AACGCGAGCT TCGACGTGGG CTTCCTGGAC
AAGGAGCTGG AACTGGTCGG CCTGGCGCCG CTGTCCGCGC ATGTCGGGGG CGTGATCGAC
ACCCTGGCCA TGGCCAAGGA GATGTTCCCG GGCAAGCGCA ACTCGCTGGA CTCGCTGTGC
GACCGGCTGG GCGTTGACAA TTCCAGTCGT ACGCTGCACG GCGCCTTGCT GGACGCGGAG
TTGCTGGCGG ATGTCTACAT CAACATGACC CGCGGGCAGG ATGCCCTGCT GATCATGGAT
GAGGCCACCG CCGGGGCAGG AGGCACCACC GTGGCCGCGG TAGATCTGAG CCGCATTGCG
CTGACGGTGC TGACCGCCAG TGCGCAGGAG CTTGCCGAGC ATGAGGAAGT ACTCGTGCAG
ATCGACAAGT CCAGCGGCGG TAAAACAATT TGGCGGACTT TGTCTGAGGC GTGA
 
Protein sequence
MSRQIVLDTE TTGLSAEGGD RIIELGCVEL VNRKLTGNNL HLYLNPERDS HEDALKVHGI 
SNEFLRDKPK FAERVQDILQ YLQGAELIIH NASFDVGFLD KELELVGLAP LSAHVGGVID
TLAMAKEMFP GKRNSLDSLC DRLGVDNSSR TLHGALLDAE LLADVYINMT RGQDALLIMD
EATAGAGGTT VAAVDLSRIA LTVLTASAQE LAEHEEVLVQ IDKSSGGKTI WRTLSEA