| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1638 |
|---|
| Symbol | |
|---|
| ID | 7384710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 1730337 |
|---|
| End bp | 1731557 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643654953 |
|---|
| Product | cysteine desulfurase IscS |
|---|
| Protein accession | YP_002553096 |
|---|
| Protein GI | 222110832 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACATGA CTCCGCATTT CCCTATCTAT CTTGACTACG GCGCCACGAC CCCCGTGGAC
GGCCGGGTCG TCGACGCGAT GATTCCCTGG TTGCGCGAAC ATTTCGGCAA CCCGGCGTCG
CGCAGCCACG CCTGGGGCTG GGAGGCCGAA GAGGCCGTGG AGCAAGCCCG CGGCCATGTG
GCCGATCTGA TCGGCGCCGA CCCGCGCGAG ATCGTGTGGA CCTCGGGCGC CACTGAATCC
AACAACCTCG CCATCAAGGG CGCTGCCCAT TTCTACCAAG GCAAGGGCAA GCATCTCATC
ACCGTGAAGA CGGAGCACAA GGCCGTCCTT GACGTGATGC GTGAACTGGA GCGCCAAGGC
TTCGAGGTGA CCTACCTCGA TGTGCAGGAG AACGGCCTGC TCGACATCGA GAAGTTCAAG
GCCGCCATCC GCCCTGACAC GATCCTGGCC AGTGTCATGT TCGTGAACAA CGAAATCGGC
GTGATCCAGG ACATTCCCCA GCTGGGTGCG CTCTGCCGCG AGAAGGGCAT CATTTTTCAT
GTGGATGCCG CGCAGGCCAC CGGCAAGGTC GAAATCGACC TGAACCAATT GCCCGTGGAT
TTGATGAGCC TGGCTTCGCA CAAGACTTAC GGACCCAAGG GCATCGGAGC CCTGTACGTG
CGCCGCAAGC CGCGCGTGCG CCTGGAAGCG CAGATGCATG GTGGCGGGCA CGAGCGTGGC
ATGCGTTCGG GCACGTTGCC CACCCACCAG ATTGTGGGCA TGGGCGAGGC TTTCCGCCTG
GCCAAGCTGG AAATGGCCCA GGATTTGGGC AAGGTCCAAG CGCTGCAAAA GCGTCTGCTG
GACGGTCTGA AGGATGTGGA GCAGGTCTTT ATCAACGGCG ACCTGGAGCG GCGCGTACCC
CACAACCTGA ACATGAGCTT CAACTTCGTG GAAGGCGAAT CCCTGATCAT GGGCATCAAG
GGACTGGCAG TGTCTTCCGG GTCGGCTTGC ACTTCGGCGA GCCTGGAACC CAGCTATGTG
CTGCGTGCCC TGGGTCGCAG CGATGAGCTG GCCCACAGCA GCCTGCGCAT GACCATTGGC
CGTTTCACGA CGGAAGAGGA AATTGACTAC GCGATCAGCA CCATCCGGCA CAACGTCGCC
AAGTTGCGTG AGTTGAGCCC CCTCTGGGAG ATGTACCAGG ATGGGGTGGA CCTGAGCACC
ATCCAATGGG CGGCTCACTG A
|
|---|
| Protein sequence | MDMTPHFPIY LDYGATTPVD GRVVDAMIPW LREHFGNPAS RSHAWGWEAE EAVEQARGHV
ADLIGADPRE IVWTSGATES NNLAIKGAAH FYQGKGKHLI TVKTEHKAVL DVMRELERQG
FEVTYLDVQE NGLLDIEKFK AAIRPDTILA SVMFVNNEIG VIQDIPQLGA LCREKGIIFH
VDAAQATGKV EIDLNQLPVD LMSLASHKTY GPKGIGALYV RRKPRVRLEA QMHGGGHERG
MRSGTLPTHQ IVGMGEAFRL AKLEMAQDLG KVQALQKRLL DGLKDVEQVF INGDLERRVP
HNLNMSFNFV EGESLIMGIK GLAVSSGSAC TSASLEPSYV LRALGRSDEL AHSSLRMTIG
RFTTEEEIDY AISTIRHNVA KLRELSPLWE MYQDGVDLST IQWAAH
|
|---|
| |