| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1636 |
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| Symbol | |
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| ID | 7384708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1727364 |
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| End bp | 1729460 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643654951 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_002553094 |
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| Protein GI | 222110830 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGAAG TCACCTCTGA GCCGGCCGCT GGCGCGGCGG ACGGGCAGTT CGTCCAGTTT
CCAGGTTCGC CCTTTTCGTT GTACCAGCCA TACCCGCCCG CCGGCGACCA GCCCGAGGCC
ATCGCCAAGC TGGTGGAGGG CGTGCAGGAC GGCGAGGTGT TCCAGACCCT GCTGGGGGTG
ACGGGCTCGG GCAAGACCTT CACCATGGCG AACGTGATCG CCCGCCTGGG ACGGCCGGCC
ATCATCTTCG CGCCCAACAA GACGCTGGCC GCACAGCTGT ACAGCGAGTT CCGCGAGTTC
TTCCCCAAGA ACGCCGTGGA GTACTTCGTG AGCTATTACG ACTACTACCA GCCCGAGGCC
TACGTGCCTC AGCGCGACCT GTTCATCGAG AAGGACAGCG CCATCAACGA GCACATCGAG
CAGATGCGCC TGTCGTGCAC CAAGAGCTTG CTGGAGCGGC GCGATGTGGT CATCGTGGCT
ACGGTGTCGG CCATCTACGG CATTGGCGAG CCCGAGAGCT ACCACCGCAT GATCATGACG
CTGCGCGTGG GTGACCAGCT GAGCCAGCGT GACGCGATCG CGCAGCTGAT CCGCATGCAG
TACCAGCGCA ACGAGCAGGA CTTCAGCCGG GGCAAGTTCC GCGTGCGTGG CGACACCATC
GATGTGTTCC CAGCCGAGCA TTCCGAGCTG GCGGTGCGCA TCGAACTGTT CGACGACGAG
GTGGAAAGCC TGCAGCTGTT CGACCCGCTC ACGGGGCGTA TCCAGCAAAA AATCCCGCGC
TTCACGGTGT ACCCCAGCAG CCATTACGTG ACGCCGCGCG ACAAGGTGCT GGCGGCCGTG
GAGACCATCA AGCAGGAACT GGACGAGCGG CTCAAGTTCT TCGTGGCCGA GGGCAAGTTG
GTGGAGGCGC AACGGCTGGA GCAGCGCACG CGCTTCGACC TGGAAATGCT CAGCGAAGTG
GGGCACTGCA AGGGCATCGA GAACTACACG CGCCACCTGT CGGGTTCTGC GCCTGGCGAG
CCGCCGAGCA CGCTGACCGA CTACCTCCCG CCCGATGCGC TGATGTTCCT GGATGAGAGC
CACCAGATGA TCGGGCAACT CAACGCCATG TACAACGGCG ACCGCGCGCG TAAGACCACG
CTGGTCGAGT ACGGCTTTCG CCTGCCGTCG GCATTGGACA ACCGGCCGCT CAAGTTCGAG
GAGTTCGAGC AGCGCATGCG GCAGGTGGTG TTTGTATCGG CCACTCCGGC TGATTATGAG
AAGGAGCACT CGGGCCAGGT GGTGGACCAG GTGGTACGGC CCACCGGCTT GGTGGACCCG
GAGGTGGAGG TGCGTCCCGC TACCCATCAG GTGGATGATG TGCTGCAAGA AATACGCATT
TGCACGCAAA AGAATCAACG CGTACTCATT ACGACGCTGA CGAAGCGCAT GGCGGAGCAA
CTGACCGATT ACCTGAGCGA CAACGGGGTC AAGGTGCGCT ATCTGCACTC CGATATCGAC
ACTGTGGAGC GCGTGGAAAT CATTCGCGAC CTGCGCCTGG GAGCCTTCGA TGTCCTGGTG
GGGATCAACC TGCTGCGTGA GGGGCTGGAC ATTCCTGAGG TCTCCCTGGT GGCCATCCTG
GATGCCGACA AGGAGGGTTT CCTGCGCGCC GAACGCAGCC TGATCCAGAC CATCGGCCGG
GCGGCGCGCA ACCTGCACGG CAAGGCCATC CTGTATGCCG ACCGGATCAC CGACTCAATG
CGCAAGGCGA TCAGCGAAAC GGAACGCCGC CGCGCCAAAC AGATCGCATA CAACGAGGCC
CGGGGTATTA CGCCGCGCAG CATCGTCAAG CAGGTGCGAG ACCTGATTGA CGGCGTGTAC
AGCGAGAAGG CAGGCCAGGA AGCCCAGCGA CTCCGCGAAG ACGCGGCGCG GCAGGCCGAA
CTGGAGGAGA TGTCCGAAAA GGACATTGCG CGCGAAATCA AGCGGCTGGA AAAGCTCATG
CTGGAACACG CCCGCAACCT GGAGTTTGAG CAGGCTGCTC GGGTGCGCGA TCAATTGACC
CGTCTCAAGG ACCGGGTGTT CGGAGCGCAT GGCGGCGATC AAATCCCTGC CGCATGA
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| Protein sequence | MHEVTSEPAA GAADGQFVQF PGSPFSLYQP YPPAGDQPEA IAKLVEGVQD GEVFQTLLGV
TGSGKTFTMA NVIARLGRPA IIFAPNKTLA AQLYSEFREF FPKNAVEYFV SYYDYYQPEA
YVPQRDLFIE KDSAINEHIE QMRLSCTKSL LERRDVVIVA TVSAIYGIGE PESYHRMIMT
LRVGDQLSQR DAIAQLIRMQ YQRNEQDFSR GKFRVRGDTI DVFPAEHSEL AVRIELFDDE
VESLQLFDPL TGRIQQKIPR FTVYPSSHYV TPRDKVLAAV ETIKQELDER LKFFVAEGKL
VEAQRLEQRT RFDLEMLSEV GHCKGIENYT RHLSGSAPGE PPSTLTDYLP PDALMFLDES
HQMIGQLNAM YNGDRARKTT LVEYGFRLPS ALDNRPLKFE EFEQRMRQVV FVSATPADYE
KEHSGQVVDQ VVRPTGLVDP EVEVRPATHQ VDDVLQEIRI CTQKNQRVLI TTLTKRMAEQ
LTDYLSDNGV KVRYLHSDID TVERVEIIRD LRLGAFDVLV GINLLREGLD IPEVSLVAIL
DADKEGFLRA ERSLIQTIGR AARNLHGKAI LYADRITDSM RKAISETERR RAKQIAYNEA
RGITPRSIVK QVRDLIDGVY SEKAGQEAQR LREDAARQAE LEEMSEKDIA REIKRLEKLM
LEHARNLEFE QAARVRDQLT RLKDRVFGAH GGDQIPAA
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