| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1567 |
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| Symbol | |
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| ID | 7382494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1651847 |
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| End bp | 1653562 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643654882 |
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| Product | putative type IV secretory pathway VirD4 component |
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| Protein accession | YP_002553027 |
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| Protein GI | 222110763 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAATA TCCTGTTGTA TTCCATTACT GCAATCCTGG CTGCTGCCGC ATTTTGGGTG
CTGCGCGGGC GAGAAAATCG CGTATTGATG TACCTACGCC ACTTCGCCGC CGCGCTGGCC
GTGGCTTCGG TTGTCATTGC CTTTGAGGGC AAAGAGGCAT ATAGCATCGG CAAACTGCTG
CTTGCCGCAG CTGTCGGCCT TGGGCTATTT TTCTATGCGC CCATCAATAT TTTTAATAAG
TTTCGTGGCG GCCTCGGAAA AATCGGCATC AGCTTTGGCG AGACTTCGGG TAGCGCAGGG
GGCGAATACA TTCGCGGGGC GAAACTCGTG AACGGCCAGC AGCTGCAAAA GATTCTCAAA
AAAGAATCCG GTTCCCTCAC CGTGGGCGGC CAGAAAATCC CTGAGCGATT GGAAGCCCGC
CATTTCATGC TGGCGGGTTC AACTGGTGTC GGTAAGTCTG TGGCAATCTC CGAAATGCTG
GATGGTATTG CGGCGCGTGG CGACCGGGTT TTTATTGCCG ACGCGGGCGG AAACTTCCTC
AAAAATTATT ACGACGAAGA ACGCGGCGAC ATTATCCTGA ATCCGCTGGA TTCACGCGCC
GTCAGTTGGT CACCGCTGGC AGAAATGGAA GGCCCTTGGG ATGCCGACCT GATTGCAAAA
TCCATCGTTC CCGATGGCGA TGGCGGCTCC AAGGAATGGA ATCAATATGC CCAGGTCATC
ACGAGCGCGG TTCTCAAACA CTGCTGGCAA AACGATCTGA CGAACTTCGA TATTTTTCGA
CTGGCAATCA TTGCCAATAT CGAGGAATTG CGGATGGTAT TTGAGGGCAC CCCGGCGCAG
CCGCTGGTGG CCGAAGGCAA TGAAAAGATG TTCGGCAGCA TTCGCGGCAT CGTCGGCACC
TACATTTCAC CCTTCCAATA CCTCGACCCC GCAGCAGGCG CGAACAATGG ATTCTCCCTC
AAATCAATTG TTGAAGACAA CGGCGCCAAG AACTGGCTAT TTTTCAACTA CCCCGACAAA
CAAATCAGCA CCGTCGCCCC AATCATCGCG GCGATGACCG ATATTGTCAG CAAGTCGATT
CTCTCGCTGG AGGCGGACAA CAACCGCAAA TTCTGGCTGA TCATTGACGA ATTCGCCAGC
GTTGGCCGGA TTTCTTCGAT TCTCGATTTT CTGACGAAGG CCCGTAAAAA CGGAGGCCGT
GCGATTATTG GCGTGCAGAC GATTTCCCAG CTCAAGAGCG CCTATGGCGT CAATGACGCA
TCGACGCTAA TGTCTTGCTT GTCTTCTCAG ATTGTTTTCC GGGTTCCCGA TCCAGACACG
GCGGATATTA TGTCTCGCCT CCTGGGCGAC CAGCAAATCA GCCGCGTTAT TCAAAGCGGC
GGTGAATCGT CGCAGAGCAT GCAAATTGGC GGCAGCAAAT CCGAGAACTG GAGCCAGCAA
ATCACGACAG ATCGAATCGT GATGACCGGC GAGATTATGA ACTTCCCCGA TCTCTACGGC
ATTCTGAATT TCGCGGGCGA CATTCCAGCG GCGCCGATTG AAGTCGAATG GATGGAGCGC
CATAAAGTCG CCGAGCACTT CCAGGCCACG ACCCGCAAGG AAATCAAGAT CGCGGCACCA
GCAAAACCCG CAGAGATTCA AAAGCCGACA GAGACAGAGA ATACCGCCGT CAGCGATTCA
GATTTGCCCG GCGTCGAATC CGACGACGTG ATCTGA
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| Protein sequence | MTNILLYSIT AILAAAAFWV LRGRENRVLM YLRHFAAALA VASVVIAFEG KEAYSIGKLL
LAAAVGLGLF FYAPINIFNK FRGGLGKIGI SFGETSGSAG GEYIRGAKLV NGQQLQKILK
KESGSLTVGG QKIPERLEAR HFMLAGSTGV GKSVAISEML DGIAARGDRV FIADAGGNFL
KNYYDEERGD IILNPLDSRA VSWSPLAEME GPWDADLIAK SIVPDGDGGS KEWNQYAQVI
TSAVLKHCWQ NDLTNFDIFR LAIIANIEEL RMVFEGTPAQ PLVAEGNEKM FGSIRGIVGT
YISPFQYLDP AAGANNGFSL KSIVEDNGAK NWLFFNYPDK QISTVAPIIA AMTDIVSKSI
LSLEADNNRK FWLIIDEFAS VGRISSILDF LTKARKNGGR AIIGVQTISQ LKSAYGVNDA
STLMSCLSSQ IVFRVPDPDT ADIMSRLLGD QQISRVIQSG GESSQSMQIG GSKSENWSQQ
ITTDRIVMTG EIMNFPDLYG ILNFAGDIPA APIEVEWMER HKVAEHFQAT TRKEIKIAAP
AKPAEIQKPT ETENTAVSDS DLPGVESDDV I
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