Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1552 |
Symbol | |
ID | 7382479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 1637718 |
End bp | 1638506 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643654868 |
Product | 3-deoxy-D-manno-octulosonate cytidylyltransferase |
Protein accession | YP_002553013 |
Protein GI | 222110749 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.595513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTCGCG CCGCACCGTT CACGGTGCTG ATACCGGCGC GCCTGGCCTC CACCCGCCTG CCCAACAAGC CCTTGGCCGA TATCGCCGGG CTGCCCATGG TGGTGCATGT GGCCCGCCGC GCCAGCCAGA GCGGCGCCCA GCGCTGCGTG GTCGCGGCGG ACGACGCGCG CATCGTCCAG GCCTGCCAGG CGCACGGGGT GCAGGCTCTG CTGACGCGCG CCGACCACGC CAGCGGCAGC GATCGCCTGG CCGAGGCCTG CGAGCTGCTG GGCCTGGCGG GCGAAGACAT TGTGGTGAAC GTACAGGGTG ATGAGCCCCT CATCGACCCA CGGCTGATCG ACGCCGTGGC CGCACTGCTG CATGCGCGCG GCGATGCCAG CATGGGCACC GCCGCGCACG CCATCGACAG CGCGGAGGAC TTTGCGAACC CCAACGTGGT GAAGGTGGTG CTGGACGCGC AGGGCCTCGC GCACTACTTC AGCCGCGCCC CCATCCCCCA CGCACGCGAC CACGGGCCGG GCAGCCTCTG GTGGCAGCCG GGCCAGACGG GGGTGCCCGT GGGTTTCGCA CCGCTACGGC ACATCGGCAT CTACAGCTAC CGGGCAGGCT TTCTGCGCCG GTTTCCACAG CTGCCAGCGG CGCCGACCGA GCAACTGGAA GCGCTGGAGC AGCTGCGCGC CCTCTGGCAC GGCCACCGCA TCGCCGTGCA CGTGACCGGC AGCGCACCCG GTGCGGGCGT GGACACGCCA GCCGACCTGG AGCGCGTGCG CACCCTCCTG GGCGGCTAG
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Protein sequence | MSRAAPFTVL IPARLASTRL PNKPLADIAG LPMVVHVARR ASQSGAQRCV VAADDARIVQ ACQAHGVQAL LTRADHASGS DRLAEACELL GLAGEDIVVN VQGDEPLIDP RLIDAVAALL HARGDASMGT AAHAIDSAED FANPNVVKVV LDAQGLAHYF SRAPIPHARD HGPGSLWWQP GQTGVPVGFA PLRHIGIYSY RAGFLRRFPQ LPAAPTEQLE ALEQLRALWH GHRIAVHVTG SAPGAGVDTP ADLERVRTLL GG
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