Gene Dtpsy_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1549 
Symbol 
ID7382476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp1635124 
End bp1635798 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID643654865 
ProductLexA repressor 
Protein accessionYP_002553010 
Protein GI222110746 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.583013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGACA GTCCCAAGCT CACCGCCCGC CAGCAGCAGA TCCTGGACCT GATCCAGACC 
GCCATCGCGC GCACCGGCGC CCCGCCCACC CGCGCCGAGA TCGCGGCAGA GCTGGGTTTC
AAGTCCGCCA ACGCGGCCGA GGAGCACCTG CAGGCGCTGG CCCGCAAGGG CGTGATCGAA
CTGGTCAGCG GCACCTCGCG CGGCATCCGA CTGCGCGGCG AAACCGTGCG CAACATCAAC
GCGGCGCGCG GCGCCCAGTT CAACCTGCCG ATACCCGGCC TGTCGCAGCT CACGCTGCCG
CTGGTGGGTC GCGTGGCGGC TGGCTCGCCC ATTCTCGCCC AGGAGCATGT GGACCAGACC
TATACGGTGG AAGGCAGCCT GTTTGCGCAC AAGCCCGACT ACCTGCTCAA GGTGCGCGGC
ATGTCCATGC GCGACGCGGG CATCATGGAC GGCGACCTGC TCGCCGTACA GGCAACGCGC
GAGGCGCGCA ACGGGCAAAT CATCGTGGCG CGCCTGGGCG ATGACGTCAC GGTCAAGCGC
CTGCGCCGCA CAGGCAGCGC CATCGAACTG CTGCCCGAGA ACCCCGACTA CCCGGTGATC
CGCGTCGAGC CGGGCGAACC TTTCGAGATC GAAGGGCTGG CCGTGGGCCT GATACGCAAC
ACCATGCTCA TGTAG
 
Protein sequence
MLDSPKLTAR QQQILDLIQT AIARTGAPPT RAEIAAELGF KSANAAEEHL QALARKGVIE 
LVSGTSRGIR LRGETVRNIN AARGAQFNLP IPGLSQLTLP LVGRVAAGSP ILAQEHVDQT
YTVEGSLFAH KPDYLLKVRG MSMRDAGIMD GDLLAVQATR EARNGQIIVA RLGDDVTVKR
LRRTGSAIEL LPENPDYPVI RVEPGEPFEI EGLAVGLIRN TMLM