| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1546 |
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| Symbol | |
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| ID | 7382473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1629682 |
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| End bp | 1633707 |
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| Gene Length | 4026 bp |
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| Protein Length | 1341 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643654862 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_002553007 |
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| Protein GI | 222110743 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCTCA CGATCACCTT TCCCGAGCAA CTCCCCGTTT CCAGCCGCCG TGACGAAATC
ATGGCGGCCA TGGCCGAGCA CCAGGTCATC ATCGTCTGCG GCGAGACGGG CTCGGGCAAG
ACCACGCAGC TGCCAAAAAT AGCGCTGGCC CTGGGACGCG GCAAGTGCAA CGCGCCCGAG
GGCGCGCGAG GACGCCTGAT CGGCCACACC CAGCCGCGGC GCATTGCCGC CAGCAGCGTG
GCCAAGCGCA TTGCCGAGGA GTTGAACACC CCCTTGGGCG AGGTGGTGGG TTACAAGGTG
CGCTTTCAGG ACACGCTGCA AAAGGGCGCT TCGGTCAAGC TGATGACCGA CGGCATCCTG
CTGGCCGAGA CGCAGACCGA TCCGCTGCTC AAGGCCTACG ACACGCTCAT CATCGACGAG
GCGCACGAGC GCAGCCTGAA TATCGACTTC CTGCTGGGCT ACCTCAAGCA GATCCTGCCG
CAGCGGCCCG ATTTGAAGGT GGTCGTGACT TCGGCCACCA TCGACGCGGA GCGCTTCGCC
AAGCACTTCG AGGGCAAGGC CGGTCCGGCG CCGGTCATCA TGGTGTCCGG GCGCACCTAT
CCCGTGGAGA TGCGCTACAA GCCCTTTGAA GAAAAGAAGG ACTTCGACCT CAACGATGCC
ATTGCCGACG GCGTGGACGA GTTGTGGACG GGCGGCAAGG GCGGAGACAT CCTCGTCTTC
CTGCCCGGCG AGCGCGAGAT CCGCGAGGCG GCGGACCACC TGCGCAAGCA CCTGCAGCAC
TCGCCAGTGC TGCGGAACGC CGAGGTACTC CCTCTGTTCT CGCGCCTGTC GCAGGCCGAG
CAGGACCGCA TCTTCGACGG CCACACCGGA CGGCGCATCG TGCTGGCCAC CAACGTGGCC
GAGACCTCGC TCACCGTGCC GGGCATCCGT TACGTCATTG ACGCAGGTAC GGCGCGCGTG
AAGCGCTATT CCTTCCGTAG CAAGGTGGAG CAGTTGCTGG TGGAGCCCAT CAGCCAGGCG
GCGGCCAACC AGCGCGCCGG GCGCTGCGGC CGCGTGGCCA ACGGCATCTG CATCCGCCTA
TACGACGAGG CGGACTTTCA CCAGCGCGAC CGCTTCACCG ACCCCGAAAT CCTGCGCTCG
TCCCTGGCGG GCGTCATCCT GCGCATGAAG TCGCTGGGCC TGGGCGACGT GGTGAACTTC
CCGTTCCTCG AGGCGCCCTC GGGCCGTGCG ATCGCCGACG GCTATCAACT GCTGCAGGAG
TTGGGCGCCG TGGACGAGCG CGGCAATTTG CTGCCCATGG GCCGCGAACT GTCGCGCCTG
CCCTTGGACC CGCGCGTGGG CCGCATGATT CTGGAGGCCC GCACCCGCGG CGCCGTGGCC
GAGGTGCTGG TCATTGCCTC GGCCCTCAGC GTGCAGGACG TGCGCGACCG GCCGCTGGAG
GCGCAGCAGC AGGCCGACCA GCAGCATGCC AAGTTCGACG ACGAGAAAAG CGAGTTCACC
GGCTACCTGC GCCTGTGGAA GTGGCTGCAG GATGCGCGCG GCGGCAAGAT CGTCGCCAAG
ACGCGCAAGG AGATGGCGGC CCAGACCGCA CCTGCGGCCC AAGCGCGCAA CACGGCCTTC
CTGCCCGTCG CACAGCGCAG CAGCGGCGCG CAAGCGGAGG GCGCAGGCGA GGAGCGCCTG
GCACAGTTCC ACCCCGCCGA TGCGGAGGAG GCCACCCACA AGCTCAGCAA CCGGCAGTGG
GAGCAGTTGC TGCGCCAGAA CTACATCAAC ATCCGCCGCG TGCGCGAGTG GCGCGACATC
CATTCGCAGC TGCTCACCGT GGTGCGGGAG CACCAGTGGC AGGTGAACAC CGAGCCCGCG
GGCTACGAGG CCGTGCACCT GTCCATGCTG TCGGGCCTGC TGGGCAACAT TGGTTACAAG
GCCGAGGAGA GCGAGGCCTA CCTGGGCGCG CACGGCATCA AGTTCCACCC GCACCCGGGC
GCGCACCTGT CCAAGAAGCC TGGCCGCTGG ATCGTCGCGG CCGAGCAGGT CGAGACCTCG
CGCCTGTACG GCCGCGGTAT CGCGGCGATC GAACCGCAAT GGCTGGAAGA GGTGGGCGGC
CATCTGCTCA AGAAGCAGCT GCTGGACCCG CATTGGTCCA AGAAACAGGC CGACGTGGTC
GCGCTCGAGC GCGCCACGCT CTACGGCCTG GTGGTCTACA ACGGCCGCCG CGTGAGCTAT
GGCCGCGTGG ATCCGTACGA GGCGCGCAAC CTGTTCATTC GCCAGGCGCT GGTCGAGGGT
GAGTGGGAGA CGCATTGGCC GTTCCTGGGC GCCAACCTCA AGCTGGTGCG CAAGGTGCAG
GAGCTGGAGC ACAAGAGCCG CCGCCAGGAC GTGCTGGTGG ACGACGAGCT CATCTTCGCC
TTCTACGACC AGCAGATTCC CAAAGACGTG TACAGCGGCG CCACGTTCGA CAAGTGGTTC
CGCAGTGCCG GCAAGGAGAA CGTCGGCCTG CTGCTTCTCA AGCGCGACGA GCTGATGCGC
CATGAGGCCG CGGGCATCAC CACCGACAAC TTTCCCAAGA CGGTGAAGCT GGGCGGCGTG
GACTGCACGG CCAGCTACCT GCACAGCCCC GGTGACGCGC GCGACGGGGT CACCGTTACG
GTGCCGCTGT TCGTGCTGAA CCAGGTGAGC GAGGAGCGTG CGGAATGGCT GGTGCCCGGC
ATGCTCAAGG ACAAGATCCA GGCACTGCTC AAGAGCCTGC CGCAGCGCCC GCGCAGCCGC
TTCGTGCCGC TGCCGGAAAG TGCTGCGCGG CTGGCGTCGC TGTTCACCGA GCAAGAGCGT
TGGGCCCAGG GCAGCTTGAT CGACACGCTG CTCAAGCAAG TGCGCGATGA AACCTCGCTC
GACGTGAAGC GCGCGGACTT CAAGCTGGAC ATGCTCAGCC CGCACCTGTT CATGAACTTT
CGCGTGACGG ATGAGCACGG CCGCCAGCTC GGCCAGGGAC GCAACCTGGG CGCGCTCAAG
GCGGAGTGGG GGAGCAAGGC ACGTGGGGCG TTCCAGGCGC TTGCTTCATT AAAGATAGCT
GGTGGCGCTC ACCAGAAGCC AGACTCCGGT GGAAAACCAT CTGAAACCAA GGAAAATAGA
GCGCCAGCAG CTATCAAAAA AGAACCACTC GTCGGCGCGC CCGCGGCCCG CAAGGCCGAT
GCCCGCTACG AGGATTGGAG CTTTGGGGAA CTGCCCGAGC TGATGGAAAT CGCCAAGGGC
AGCCAGACGC TGATCGGTTT CCCCGCGCTC ATCGACCACG GCGATGCGGT GGGCATCGAG
GTGTTCGACG AACCCGAAGT CGCCGCCGCG CGCCACCGCG TGGGCCTGCG CCGGCTGTTT
GCGCTGCAGA TCAAGGACGC GCTCAAGTAC CTGGAAAAGA ACATCCCCGA TCTGCAGAAA
ATGGCCGTGG CTTTCATGCC GCTGGGCACG CAGGAGGAGC TGCGCGCACA AATCATCGAC
GTGGCCATCG ACCGCGCCTT CCTGCAGGAG CCGCTGCCCA GCAACGAGGC ACAGTTCAAG
CAGCGCGTGC AGGACGGGCG CGGGCGCCTC ACGCTGATCG CCAACGAGGT GGCGCGCATG
GCGGCGGCCA TCCTCATCGA ATACGCCGCC ACGCAGCGCA AGATCAAAGA CACCAAGAAC
GCTCCCGAGG CCACGGCCGA CGCGTCACAG CAGCTGCAGC GCCTGATGCC CAAGCAGTTC
ATCGCTGCCG CGCCCTGGGC GCAGCTGCAG CACTACGCGC GCTACCTCAA GGCCATCGCC
ACGCGCCTGG ACAAGTACCG CGCCGACCCG GCACGCGATG CCGCCAAGCT CAAGGAACTG
CAGCCGCTGG AGCAGCGCTA TTGGCGCATG GTCGCCGAGC GCAAGGGCCA GGTGGATGCC
CGTATGCAGG AGTACCGCTG GATGCTGGAG GAACTGCGCG TGAGCTTCTT CGCGCAGGAG
TTGCGCACGC CGTATCCGGT CAGCGGCAAG CGGCTGGACA AGGTCTGGTC GCAACTGGTG
TCTTGA
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| Protein sequence | MPLTITFPEQ LPVSSRRDEI MAAMAEHQVI IVCGETGSGK TTQLPKIALA LGRGKCNAPE
GARGRLIGHT QPRRIAASSV AKRIAEELNT PLGEVVGYKV RFQDTLQKGA SVKLMTDGIL
LAETQTDPLL KAYDTLIIDE AHERSLNIDF LLGYLKQILP QRPDLKVVVT SATIDAERFA
KHFEGKAGPA PVIMVSGRTY PVEMRYKPFE EKKDFDLNDA IADGVDELWT GGKGGDILVF
LPGEREIREA ADHLRKHLQH SPVLRNAEVL PLFSRLSQAE QDRIFDGHTG RRIVLATNVA
ETSLTVPGIR YVIDAGTARV KRYSFRSKVE QLLVEPISQA AANQRAGRCG RVANGICIRL
YDEADFHQRD RFTDPEILRS SLAGVILRMK SLGLGDVVNF PFLEAPSGRA IADGYQLLQE
LGAVDERGNL LPMGRELSRL PLDPRVGRMI LEARTRGAVA EVLVIASALS VQDVRDRPLE
AQQQADQQHA KFDDEKSEFT GYLRLWKWLQ DARGGKIVAK TRKEMAAQTA PAAQARNTAF
LPVAQRSSGA QAEGAGEERL AQFHPADAEE ATHKLSNRQW EQLLRQNYIN IRRVREWRDI
HSQLLTVVRE HQWQVNTEPA GYEAVHLSML SGLLGNIGYK AEESEAYLGA HGIKFHPHPG
AHLSKKPGRW IVAAEQVETS RLYGRGIAAI EPQWLEEVGG HLLKKQLLDP HWSKKQADVV
ALERATLYGL VVYNGRRVSY GRVDPYEARN LFIRQALVEG EWETHWPFLG ANLKLVRKVQ
ELEHKSRRQD VLVDDELIFA FYDQQIPKDV YSGATFDKWF RSAGKENVGL LLLKRDELMR
HEAAGITTDN FPKTVKLGGV DCTASYLHSP GDARDGVTVT VPLFVLNQVS EERAEWLVPG
MLKDKIQALL KSLPQRPRSR FVPLPESAAR LASLFTEQER WAQGSLIDTL LKQVRDETSL
DVKRADFKLD MLSPHLFMNF RVTDEHGRQL GQGRNLGALK AEWGSKARGA FQALASLKIA
GGAHQKPDSG GKPSETKENR APAAIKKEPL VGAPAARKAD ARYEDWSFGE LPELMEIAKG
SQTLIGFPAL IDHGDAVGIE VFDEPEVAAA RHRVGLRRLF ALQIKDALKY LEKNIPDLQK
MAVAFMPLGT QEELRAQIID VAIDRAFLQE PLPSNEAQFK QRVQDGRGRL TLIANEVARM
AAAILIEYAA TQRKIKDTKN APEATADASQ QLQRLMPKQF IAAAPWAQLQ HYARYLKAIA
TRLDKYRADP ARDAAKLKEL QPLEQRYWRM VAERKGQVDA RMQEYRWMLE ELRVSFFAQE
LRTPYPVSGK RLDKVWSQLV S
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