Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1499 |
Symbol | |
ID | 7385141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 1575656 |
End bp | 1577164 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643654815 |
Product | RND efflux system, outer membrane lipoprotein, NodT family |
Protein accession | YP_002552960 |
Protein GI | 222110696 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGCGCC CAAAGGACCG GGCGCTGCGA ACGAAATTGC GGATTACCAT CGCCGGCCTG CGTATGCCCT TCGCCCTCCC CGCCCTCGTG TCGCTCCTTG ACAGCCCAGC GCTGCGCACG GGCCTGCTCG GGATCTGCGT CACAGTCGCC GGATGCATGG CAGGGGTGCG AACGGACGTG CCCTCCCCTG CGCTGCTGCC CGCCGCATGG CCCGTGCCAC CCGTCGCCTT CGATGACAGC ACCGTCAGCG TTGACGACCA GGCCGAGTGG GGGATGTTCT ACCGCGACCC CACACTGCAA GGCCTGGTGC GCCAGGCGCT CGAGAACAAC CGCGACCTGC GCCTGGCAAT GCTGCGCGTG GACGAGGCGC GCGCCGCCCT GGGCCTGCAG TCCGCCGAAC GCTGGCCGAC CCTGGCCGTG GGCAGCAGCC ACACCCGCGC ACGCGTGCCG GGGGACCTGA ACGTGAGCGG CCGCGCCGTC ACCACCGGCG AGCACCGCGT GGGCCTTGCC ATCAGCAACT GGGAGCTGGA TCTGTGGGGC CGCGTGCGCA GCCTGGAGGC GGCAGCGCAG CAGGCCTACT TCGCCTCCGC CGAAGGCAGC CGCGCCGCCC AGGCCGCACT GGTGAACCAG GTGGCACGCA ACTACCTCGC ATGGCGCGAA ACGCAGGAAC GCATCGCGCT GACAGAAGAC ACCATCGCCA CGCGCCGCGA GAGCCTGCGC ATCTTCGGGC GCCGCCACGC GGCCGGCGCC ATCTCGCGCC TGGCGCTGAC GCAGGTGGAA TCTCTGCTGT ACCAGGCCGA ATCCATCGGC ACCCAGCTCG CGCAGCAGCA GGCACTGCAG GCCCATGCGC TGGCGCAGCT CGTGGGCGTA CCGTGGGATG CGCTGGCCCT GGCGCCGCCC CAGGCTGCCG TCGCCCTTCC CACCGTGCCC GCGGGATTGC CTTCCGACCT GCTGCTGCGC CGCCCCGACA TTGCCGCCGC CGAGCACACC CTGCACGCCG CCAACGCCCG CGTGCAAGCC GCGCGCGCAG CGTTCTTTCC GCGCATCGCT CTGACCACGA GTGCGGGCAC CGCCAGCGCG CACCTGGACG GCCTGTTCGA CAGCGGCAGC CGCGCCTGGA CGTTCGCTCC CAGCATCTCT GTGCCGCTCT TCGACGGCGG GCGCCTGCAG TCCAACCTGG ATCTGAGCGC CGCACGCCAG AACATCGCTG TGGCCGACTA CGAAAAGACC GTGCAGACGG CCTTCCGCGA AGTGTCAGAC GCATTGGCCA CGCGCGCCAC GGCAGCGCGC CAGATCACGC TGCAGCAGGC CCAGCGCGAC GCCTTGCATG AACGCGCACG TTTGGCGCAA CTGCGCTACG ACCACGGTGC CACGCCCTAC TTCGAAGTGC TGGATGCCCA GCGCGACCTG CTGGCCGCCG AGCAGCAACT CGTGCAGGCA CGCTATGCGC TACAGGCAGC ACACATCGCC GTCTATGCCG CGCTGGGCGG CGGCGCGCCC GCGCGCTGA
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Protein sequence | MGRPKDRALR TKLRITIAGL RMPFALPALV SLLDSPALRT GLLGICVTVA GCMAGVRTDV PSPALLPAAW PVPPVAFDDS TVSVDDQAEW GMFYRDPTLQ GLVRQALENN RDLRLAMLRV DEARAALGLQ SAERWPTLAV GSSHTRARVP GDLNVSGRAV TTGEHRVGLA ISNWELDLWG RVRSLEAAAQ QAYFASAEGS RAAQAALVNQ VARNYLAWRE TQERIALTED TIATRRESLR IFGRRHAAGA ISRLALTQVE SLLYQAESIG TQLAQQQALQ AHALAQLVGV PWDALALAPP QAAVALPTVP AGLPSDLLLR RPDIAAAEHT LHAANARVQA ARAAFFPRIA LTTSAGTASA HLDGLFDSGS RAWTFAPSIS VPLFDGGRLQ SNLDLSAARQ NIAVADYEKT VQTAFREVSD ALATRATAAR QITLQQAQRD ALHERARLAQ LRYDHGATPY FEVLDAQRDL LAAEQQLVQA RYALQAAHIA VYAALGGGAP AR
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