| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1497 |
|---|
| Symbol | |
|---|
| ID | 7385139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 1571730 |
|---|
| End bp | 1574540 |
|---|
| Gene Length | 2811 bp |
|---|
| Protein Length | 936 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643654813 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002552958 |
|---|
| Protein GI | 222110694 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCAGC ACCTTGAGAC CGCCACCCCC GTGGCCCGGC TGCGGGACGT GCAACTGCGC
TACGGCGCGG CCCAGGCCCT GCGCGGCATC ACGCTGGACA TACCGACCGG CCGCATGGTG
GGCCTGATCG GGCCGGACGG CGTGGGCAAG TCCAGCCTGC TGGCGTTGAT GGCCGGCGCG
CGCGCACTGC AGCAGGGCAG CGTGCAGGTG CTGGGCGGCG ACATGGCGCG CAAGGCGCAC
CGCGACGCGA TCTGCCCGCG CATCGCCTAC ATGCCGCAGG GCCTGGGCAA GAACCTCTAC
CCCACGCTGT CGGTCGAGGA GAACCTGCAG TTCTTCGCGC GCCTGTTCGG CCACGGCGCG
GCCGAACGGC GCAGGCGCAT TGACGACCTC ACGCGCAGCA CAGGCCTGTA CCCCTTCCTC
GCGCGGCCCG CGGGCAAGCT CTCGGGCGGC ATGAAGCAAA AGCTGGGGCT GTGCTGCGCG
CTGATCCATG ACCCTGACCT GCTGATCCTG GACGAGCCCA CCACCGGCGT GGACCCCCTT
GCACGCGCGC AGTTCTGGGA GCTGATCGCC CGCATCCGCA CCGAGCGCGC GCACATGAGC
GTGATCGTCG CCACCGCCTA CATGGACGAG GCGCAGCGCT TCGACTGGCT GGTGGCCATG
GACGATGGCG CCGTTCTTGC CACGGGCACA CCGCAAGAGC TGCTGCAGCG TGCTGGCGTC
GACACCCTGG AGGAAGCCTT CATCGCCCTG CTGCCCGAAG CCCGGAAGCG CGGCCACAGC
CCGGTGGTGA TTCCACCGCT GCCGACCAAC GGCGAGGACG ACATTGCCAT CGAGGCGCAG
GGCCTGACCA TGCGCTTTGG CGACTTCGTG GCCGTGGACC AGGTGAGCTT TCGCATCCGA
CGCGGCGAGA TCTTCGGCTT TCTGGGCTCC AACGGCTGCG GCAAGTCCAC CACCATGAAG
ATGCTCACCG GACTGCTGCC TGCGTCCGAG GGCCGTGCCT GGCTGTTCGG GCAGGCGGTG
GACCCGCACG ACATGGCCAC GCGCCGGCGC GTGGGCTACA TGTCGCAGGC GTTCTCGTTG
TATGGCGAGC TGACGGTGGA GCAGAACCTG GTGCTGCACG CGCGCCTGTT CCATGTGCCG
GAAGAACAGG TCACAGCGCG CGTGGACGAG ATGCTGCAGC GCTTTGCCCT GCAGGACGAG
CGTGCCACCC TGCCCGCCAA CCTGCCGCTG GGCATGCGCC AGCGCCTGTC GCTGGCCGTG
GCCATGGTGC ACCGGCCCGA GTTGCTGATC CTGGACGAGC CCACCTCCGG CGTGGACCCG
GTGGCGCGCG ACGCCTTCTG GCGCCTGCTG GTCGAACTGT CGCGCCGCGA CCGTGTGACG
ATCTTCATCT CCACCCATTT CATGAACGAG GCCGAGCGCT GCGACCGCAT GTCCATGATG
CACGCGGGTC GGGTGCTGGA CAGCGACACG CCGGCCGCGC TGATGGCCCG GCGCGGCGCC
CAGACGCTGG AGCAGGCGTT CATCGGCTAC CTGCTGGAGG CCGCTGGCGA GCCCATTGCA
GATGACAACG CTACGAAAAC AGGAGCTTCC AGCGCTCTAT CGACGGTCGT ATCAAACGCA
AAAGAGTTTG AAACACCCGC AGATCAAGCG GCGGCAGCTC CTGAAATAGA AGCACCCCGG
CACCGCGCCT TCAGCCTGCA GCGCATGCTG AGCTACATGT GGCGCGAGTC GCTGGAGCTG
CGCCGCGACC CGGTGCGCGC CACGCTGGCA CTGGCGGGCT CGCTGATCCT GATGTTCGTG
ATCGGCTACG GCATCAACAT GGACGTGGAG AACCTGCGCT ACGCCGTGCT CGACCGCGAC
CAGACCACGC TGAGCCAGAG CTATGCCAAC GCGCTCTCGG GATCGCGCTA TTTCATCGAG
CAACCGCCGC TGTCGGACCA TGCCGAGCTG GACCGGCGCA TGCGAAGCGG CGAGCTCTCG
CTGGCCATCG AGATCCCCAG CGGCTTTGCC CGCGACGTGC TGCGCGGCAA GAACGTGGAG
ATCGGCGCCT GGGTGGACGG CGCCATGCCC ATGCGCGCGG AGACCGTGCG CGGCTATGTG
CAAGGCATGC ACCAGCATTG GCTGGCCGCG CAACTGCACG AGCGCACGGG GCAGCGCCTG
GCCAGCAGCG TGACCGTGCA ATCGCGCTAC CGCTACAACC CCGACGTGCG CAGCCTGCCC
GCCATGGTGC CGGCGGTGAT TCCGCTCTTG ATGCTCATGC TGCCGGCCAT GCTCACGGCG
CTGGCCGTGG TGCGCGAGAA GGAGATGGGC TCCATCCTCA ACCTGTACGT TACACCCGTC
ACACGCACCG AATTCCTGCT GGGCAAGCAA CTGCCCTACG TGTTGCTGGC CATGCTGAAC
TTCCTGCTCA TGTGCCTGCT GGCGGTGACC GTGTTCGGCG TGCCCATCAC CGGCAGCTTT
GCCACGCTGG CGCTGGCAGC GCTGGTGTTC TCGGTCACCT CCACCGGCAT GGGCCTGCTG
GCCAGCAGCG TCACGCGCAG CCAGATCGCA GCCATGTTCT TCGCACTCAT CGGCACGCTG
ATACCAGCGG TGCAGTTCTC GGGCCTGATC GATCCCGTCT CGTCGCTGGA GGGCAGCGGC
CGCCTCATCG GCTCGGTCTA CCCGGCCACG TACATGTTCA TGATCAGCCG CGGCGTCTTC
AGCAAGGGAC TGGGACTGGC CGACCTGCAG GGAGCGCTGC TGCCGCTGCT GGCGTCGGTG
CCCGTGGTCA TGCTGGGCGC GATTGCGCTG CTGAAGAAGC AGGAGCGCTG A
|
|---|
| Protein sequence | MPQHLETATP VARLRDVQLR YGAAQALRGI TLDIPTGRMV GLIGPDGVGK SSLLALMAGA
RALQQGSVQV LGGDMARKAH RDAICPRIAY MPQGLGKNLY PTLSVEENLQ FFARLFGHGA
AERRRRIDDL TRSTGLYPFL ARPAGKLSGG MKQKLGLCCA LIHDPDLLIL DEPTTGVDPL
ARAQFWELIA RIRTERAHMS VIVATAYMDE AQRFDWLVAM DDGAVLATGT PQELLQRAGV
DTLEEAFIAL LPEARKRGHS PVVIPPLPTN GEDDIAIEAQ GLTMRFGDFV AVDQVSFRIR
RGEIFGFLGS NGCGKSTTMK MLTGLLPASE GRAWLFGQAV DPHDMATRRR VGYMSQAFSL
YGELTVEQNL VLHARLFHVP EEQVTARVDE MLQRFALQDE RATLPANLPL GMRQRLSLAV
AMVHRPELLI LDEPTSGVDP VARDAFWRLL VELSRRDRVT IFISTHFMNE AERCDRMSMM
HAGRVLDSDT PAALMARRGA QTLEQAFIGY LLEAAGEPIA DDNATKTGAS SALSTVVSNA
KEFETPADQA AAAPEIEAPR HRAFSLQRML SYMWRESLEL RRDPVRATLA LAGSLILMFV
IGYGINMDVE NLRYAVLDRD QTTLSQSYAN ALSGSRYFIE QPPLSDHAEL DRRMRSGELS
LAIEIPSGFA RDVLRGKNVE IGAWVDGAMP MRAETVRGYV QGMHQHWLAA QLHERTGQRL
ASSVTVQSRY RYNPDVRSLP AMVPAVIPLL MLMLPAMLTA LAVVREKEMG SILNLYVTPV
TRTEFLLGKQ LPYVLLAMLN FLLMCLLAVT VFGVPITGSF ATLALAALVF SVTSTGMGLL
ASSVTRSQIA AMFFALIGTL IPAVQFSGLI DPVSSLEGSG RLIGSVYPAT YMFMISRGVF
SKGLGLADLQ GALLPLLASV PVVMLGAIAL LKKQER
|
|---|
| |