Gene Dtpsy_1475 details

Gene Information

• Locus tag: Dtpsy_1475
• ID: 7385117
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 1546050
• End bp: 1547969
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643654792
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_002552937
• Protein GI: 222110673
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAACAATC AGTGGTTTTC AAAAGTCGCC GTCTGGCTGG TCATTGCCAT GGTGCTCTTT 
ACGGTGTTCA AACAATTTGA CACCCGTGCG GGCGCGGGCG CCGGAACCAT CGGCTATTCG 
GAATTCCTGG AAGAGGTGCG CAGCAACCGC ATCAAGAGCG CGACGATCCA GGAAGGGCAG 
GGCGGCACCG AGATCGTGGC GGTCACCAAT GATGACCGCC GCATCCGCAC CACGGCCACC 
TACCTCGACC GCGGCCTCGT GGGCGACCTG ATCAACAACA ACGTCAAGTT CGACGTCAAG 
CCGCGCGAAG AAGGCTCGCT GCTCATGACC CTGCTGGTCA GCTGGGGCCC GATGCTGCTG 
CTGATCGGCG TGTGGGTGTA CTTCATGCGC CAGATGCAGG GTGGCGGCAA GGGCGGTGCG 
TTCAGCTTCG GAAAATCGAA GGCGCGCATG CTGGACGAGA ACAACAACAC CGTCACCTTC 
GCGGACGTGG CGGGCTGCGA CGAGGCCAAG GAAGAGGTGA AGGAAGTGGT CGACTTCCTG 
AAGGACCCGC AGAAATTCCA GAAGCTCGGT GGCCGCATCC CGCGTGGCCT GTTGCTGGTC 
GGCCCTCCGG GCACCGGCAA GACGCTGCTG GCCAAGTCCA TTGCTGGCGA AGCCAAGGTG 
CCGTTCTTCA GCATCTCGGG CTCCGACTTC GTGGAAATGT TCGTCGGCGT GGGCGCGGCC 
CGCGTGCGCG ACATGTTCGA GAACGCCAAG AAGAACGCCC CCTGCATCAT CTTCATCGAC 
GAAATCGACG CCGTGGGCCG CCAGCGTGGC GCCGGCCTGG GCGGCGGCAA CGACGAGCGC 
GAGCAGACGC TGAACCAGAT GCTCGTCGAG ATGGACGGCT TCGAGACCAA CCTGGGCGTG 
ATCGTCGTGG CTGCGACCAA CCGTCCCGAT ATCCTGGACG CTGCATTGCT GCGTCCCGGC 
CGTTTTGACC GCCAGGTGTA TGTGACGCTG CCCGACATTC GCGGCCGCGA GCAGATCCTG 
GGCGTGCACA TGCGCAAGAT CCCGGTGGGG CAGGACGTGA ACCCCGCCAT CATCGCGCGC 
GGAACGCCCG GCATGTCCGG CGCAGACCTG GCCAACCTGT GCAACGAAGC AGCGTTGATG 
GCTGCACGGC GCAATGCGCG CACGGTGGAG ATGCAGGACT TCGAGAAGGC CAAGGACAAG 
ATCATCATGG GCCCTGAGCG CAAGACCATG GTCATGCCCG AGGAAGAGCG CCGTAATACG 
GCCTACCACG AAGCAGGCCA TGCGCTGATC GGCAAGTTGT TGCCGAAGTG CGACCCGGTG 
CATAAGGTCA CCATCATTCC GCGCGGCCGC GCGCTGGGCG TGACCATGAG CCTGCCCGAG 
AAGGACCGCT ACTCCTACGA CAAGGAGTAC ATGCTGAACC AGATCGCCAT GCTGTTCGGC 
GGGCGCATTG CCGAAGAAGT GTTCATGAAC CAGATGACCA CGGGAGCCAG CAATGACTTC 
GAACGCGCCA CGTCCATCGC GCGCGACATG GTGATGCGCT ACGGCATGAG TGAGGCCCTG 
GGGCCCATGG TGTACGCGGA GAACGAAGGC GAAGTGTTCC TGGGCCGTTC GGTGACCAAG 
ACCACCAATA TTTCCGAAGA AACCATGCAG AAGGTGGATG CTGAGGTGCG TCGCATCATC 
GACGAGCAGT ACGGATTGGC ACGCCGCCTG ATCGAAGAGA ACCAGGACAA GATGCACGCC 
ATGGCGAAGG CCATGCTGGA GTGGGAAACC ATCGATGCCG AACAGCTGGA CGACATCATG 
GCCGGCCGGG CGCCTCGCCC GCCCAAGGAC TGGACGCCGC GCACCCCTCC TTCGGGTGGT 
GATGGTTCCA GCGGCGGCAC TCCGGCCGTC AAGCCGGACC CGGCGCCCTC CGCCGCCTGA 

 

Protein sequence

MNNQWFSKVA VWLVIAMVLF TVFKQFDTRA GAGAGTIGYS EFLEEVRSNR IKSATIQEGQ 
GGTEIVAVTN DDRRIRTTAT YLDRGLVGDL INNNVKFDVK PREEGSLLMT LLVSWGPMLL 
LIGVWVYFMR QMQGGGKGGA FSFGKSKARM LDENNNTVTF ADVAGCDEAK EEVKEVVDFL 
KDPQKFQKLG GRIPRGLLLV GPPGTGKTLL AKSIAGEAKV PFFSISGSDF VEMFVGVGAA 
RVRDMFENAK KNAPCIIFID EIDAVGRQRG AGLGGGNDER EQTLNQMLVE MDGFETNLGV 
IVVAATNRPD ILDAALLRPG RFDRQVYVTL PDIRGREQIL GVHMRKIPVG QDVNPAIIAR 
GTPGMSGADL ANLCNEAALM AARRNARTVE MQDFEKAKDK IIMGPERKTM VMPEEERRNT 
AYHEAGHALI GKLLPKCDPV HKVTIIPRGR ALGVTMSLPE KDRYSYDKEY MLNQIAMLFG 
GRIAEEVFMN QMTTGASNDF ERATSIARDM VMRYGMSEAL GPMVYAENEG EVFLGRSVTK 
TTNISEETMQ KVDAEVRRII DEQYGLARRL IEENQDKMHA MAKAMLEWET IDAEQLDDIM 
AGRAPRPPKD WTPRTPPSGG DGSSGGTPAV KPDPAPSAA