Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1467 |
Symbol | |
ID | 7385109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1540575 |
End bp | 1541216 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643654784 |
Product | SNARE associated Golgi protein |
Protein accession | YP_002552929 |
Protein GI | 222110665 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACTCG TCAGCTTTCT CATCGACTTC ATCCTGCACG TGGACAAGTA CCTCGAGGCC TTCGTCGCCA ACTACGGCGC CTGGGTGTAC GCGCTGCTGT TCCTCATCGT CTTCGTGGAG ACGGGCGTGG TGGTCATGCC CTTCCTGCCG GGCGACTCGC TGCTGTTCAT CGTCGGCGCG CTCAGCGGCG CGGGGCTGCT GAACTTCCCG CTGGCCTGCG CCATCTTGCT GGTGGCGGCC ATTCTGGGCG ATCAGTGCAA CTACACCATT GGGCGCTATT TCGGGCCGAA GGTGTTCCAG TGGGAGGATT CGCGCTGGTT CAACAAGCGG GCGTTTGACC AGGCGCATGG GTTCTACGAG CGCTATGGCG GTATCACCAT CGTGCTGGCG CGCTTCATGC CGTTCATTCG CACCTTTGCC CCCTTTGTGG CGGGTGTGGC GGCCATGGGG CGGGGCAAAT TCTCGGCCTA TAACGTGGGC GGTGCGCTGG TGTGGGTGCT GGGCATCTGC ACGGCGGGCT ATTTCTTCGG CAACCTGCCC TGGGTGCGCC AGCACCTGGA GAAGATCATC TGGGGCCTGA TTCTGGTGCC GGGGCTGATC GCCATCTTCG GCGCCTGGCG CGCCGGACGT AAAACGGCGT AA
|
Protein sequence | MELVSFLIDF ILHVDKYLEA FVANYGAWVY ALLFLIVFVE TGVVVMPFLP GDSLLFIVGA LSGAGLLNFP LACAILLVAA ILGDQCNYTI GRYFGPKVFQ WEDSRWFNKR AFDQAHGFYE RYGGITIVLA RFMPFIRTFA PFVAGVAAMG RGKFSAYNVG GALVWVLGIC TAGYFFGNLP WVRQHLEKII WGLILVPGLI AIFGAWRAGR KTA
|
| |