Gene Dtpsy_1467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1467 
Symbol 
ID7385109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp1540575 
End bp1541216 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content63% 
IMG OID643654784 
ProductSNARE associated Golgi protein 
Protein accessionYP_002552929 
Protein GI222110665 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTCG TCAGCTTTCT CATCGACTTC ATCCTGCACG TGGACAAGTA CCTCGAGGCC 
TTCGTCGCCA ACTACGGCGC CTGGGTGTAC GCGCTGCTGT TCCTCATCGT CTTCGTGGAG
ACGGGCGTGG TGGTCATGCC CTTCCTGCCG GGCGACTCGC TGCTGTTCAT CGTCGGCGCG
CTCAGCGGCG CGGGGCTGCT GAACTTCCCG CTGGCCTGCG CCATCTTGCT GGTGGCGGCC
ATTCTGGGCG ATCAGTGCAA CTACACCATT GGGCGCTATT TCGGGCCGAA GGTGTTCCAG
TGGGAGGATT CGCGCTGGTT CAACAAGCGG GCGTTTGACC AGGCGCATGG GTTCTACGAG
CGCTATGGCG GTATCACCAT CGTGCTGGCG CGCTTCATGC CGTTCATTCG CACCTTTGCC
CCCTTTGTGG CGGGTGTGGC GGCCATGGGG CGGGGCAAAT TCTCGGCCTA TAACGTGGGC
GGTGCGCTGG TGTGGGTGCT GGGCATCTGC ACGGCGGGCT ATTTCTTCGG CAACCTGCCC
TGGGTGCGCC AGCACCTGGA GAAGATCATC TGGGGCCTGA TTCTGGTGCC GGGGCTGATC
GCCATCTTCG GCGCCTGGCG CGCCGGACGT AAAACGGCGT AA
 
Protein sequence
MELVSFLIDF ILHVDKYLEA FVANYGAWVY ALLFLIVFVE TGVVVMPFLP GDSLLFIVGA 
LSGAGLLNFP LACAILLVAA ILGDQCNYTI GRYFGPKVFQ WEDSRWFNKR AFDQAHGFYE
RYGGITIVLA RFMPFIRTFA PFVAGVAAMG RGKFSAYNVG GALVWVLGIC TAGYFFGNLP
WVRQHLEKII WGLILVPGLI AIFGAWRAGR KTA