| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1464 |
|---|
| Symbol | |
|---|
| ID | 7385106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 1536517 |
|---|
| End bp | 1537926 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643654781 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_002552926 |
|---|
| Protein GI | 222110662 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.173941 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAGC GCAGCCTGTC CTGGTCGCTC ACGCGCGCCC TGCTGCCCTG GGTGGCGCTG
GTGTGGGTGG CCATCAGCCT GGGCGTGGCC TGGTATGTGC AGCATGAGCT GGCCGAGCAG
CTTGACGCCG GGCTGGTCGA GAGCGCGGAA CGCCTGCTCG ACCTGGCGGC ACACGATGCA
CGCAACCACG AGAAGCCCTC CGAACGCGAC GGCACGCTGT TCCGGCTGGA GGTGCCTCAC
AGCAAGCTGC ACGGCGCCAA GCACGACGTG TTGCTGTACC AGGTGGTGAA CACCGACAAC
GAGCTGCTGC TGCGCTCGGC CGACGCGCCA CGCTACCCTT TGCCGGTGCC CCTGAGCACC
GGCTTTCGCG AATACGCCGG CCTGCGCATC TACACCCTGG CCCACCCCAG CCTGCCCATG
TACATCCACG CGGGCGACCC GCTGGCACAC CGCCAGGCCA CGCGCACACG CACGCTGCTG
GGCTTGCTGG TGCCGCTGCT GGTGGTGCTG CCGCTGCTGG GCTGGCTGAT TCGCACCGTC
ACCCGCCGGG TGCTCGCCCC CGCCGGACAG ATTGCCCGCG AACTGCAGCA GCGCGACGGC
AGGCACCTGG CCCCGCTGGC GCCGGCGCAG CCCCTGCCCG CCGAGCTGCA AACCATCGTC
GGCAGCGCCA ACCACCTGCT GCAGCGCCTG GAAGGCGCGC TGGACACCGA ACGCGCCCTG
GCCGCCAACG CCGCCCACGA GCTGCGCACC CCCCTGGCCA CCGTGCGCCT GCGCCTGCAG
ACCGCGCTGG CCCAGGTGGC CGACGGCCCC GCACGGCAGC GCGTGGCGGA GGCGCTGGAC
GCACTCGACC AACTGGGCCG GCGCAGCGAA AAGCTGCTGC AGCTCTCACG CGCCGAGTCG
GGCGCGGCGC TGGTACAAGA GCGCGTGAAC CTTGGCCAGC TGGCCGCCGT GGTGGCGCAG
GAATTCTGGT CCGACCCCGC GCTGCTGCAG CGCCTGCACC TGGTGCTGCC CGAGAGCGAG
GACGTGTGGG TGCGCGGCGA TTTCGACGCG CTGGCCATCG CACTGCGCAA CCTGGTGGAA
AACGCCGTGC GCTACGCCCC CAGCGGGCCG GTGACGATCG CGGTGGAGGC GCCTGCCACC
TGCAGCGTCA GCGACGAGGG CCCGGGGCTT TCGCCCGAGC GCGCGCACGC GCTGCTGCAG
CGCCACCAGC GCAACGGCCA TGCGCCCCCG GCCTGCAGCG CGCCAGCGCA TGTGCCCGGC
TACGGGCTGG GCCTGTCGAT CGTATCGACC ATCGTGCAGC GCCAGGGCGG CGCGCTGGCA
CTGCAGTCGC CACCGCCCGG CCAGCCCCAC GGGCTGCGCG CTGCGTTGGT GCTGCGCGCA
GCGGACCAGC CCACCGCGCC TGGCATTTGA
|
|---|
| Protein sequence | MKQRSLSWSL TRALLPWVAL VWVAISLGVA WYVQHELAEQ LDAGLVESAE RLLDLAAHDA
RNHEKPSERD GTLFRLEVPH SKLHGAKHDV LLYQVVNTDN ELLLRSADAP RYPLPVPLST
GFREYAGLRI YTLAHPSLPM YIHAGDPLAH RQATRTRTLL GLLVPLLVVL PLLGWLIRTV
TRRVLAPAGQ IARELQQRDG RHLAPLAPAQ PLPAELQTIV GSANHLLQRL EGALDTERAL
AANAAHELRT PLATVRLRLQ TALAQVADGP ARQRVAEALD ALDQLGRRSE KLLQLSRAES
GAALVQERVN LGQLAAVVAQ EFWSDPALLQ RLHLVLPESE DVWVRGDFDA LAIALRNLVE
NAVRYAPSGP VTIAVEAPAT CSVSDEGPGL SPERAHALLQ RHQRNGHAPP ACSAPAHVPG
YGLGLSIVST IVQRQGGALA LQSPPPGQPH GLRAALVLRA ADQPTAPGI
|
|---|
| |