| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1398 |
|---|
| Symbol | |
|---|
| ID | 7382650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 1466835 |
|---|
| End bp | 1467548 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643654716 |
|---|
| Product | 3-demethylubiquinone-9 3-methyltransferase |
|---|
| Protein accession | YP_002552862 |
|---|
| Protein GI | 222110598 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | [TIGR01983] ubiquinone biosynthesis O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTTT CTGTAAACGC CGATCCCGCT GAGTTGGCCA AGTTTTCGGA ACTGGCCCAT
CGCTGGTGGG ACCCCGACAG CGAATTCCGT CCGCTGCACC AAATCAATCC GTTGCGGCTG
GATTGGATCA ATCAACTCTC GCCTCTGGAA GGGCGCAAGG TTCTCGACGT GGGGTGCGGC
GGGGGAATTC TGTCGGACTC CATGGCCCGC AAGGGGGCAG AAGTCACGGG GATCGACCTG
GCGTCCAAGG CATTGCGCGT GGCGCGGCTC CATGCCCTGG AGGCGGAAAC GCCGCGCGTA
CAGTACCGGG AGATCAGCGT CGAGGAGTTG GCAAACGAGT GTCCTGGGTC GTTCGACACG
GTCACCTGCA TGGAGATGCT GGAGCACGTG CCCGATCCCC AGTCGGTCGT GGCCGCATGC
GCGCGCCTCG TCAAGCCAGG CGGATGGGTG TTCTTCTCTA CGATCAACCG GAATGCGAAG
GCCTTTGCGT TGGCGATCGT TGGGGCGGAA TACCTGCTCA AGATGCTGCC CCAGGGAACG
CATGAGTACG CCAAATTCAT CCGCCCTAGT GAGCTGGCAT CCGCATGCCG CCAGGCGGGC
CTTGATGTGT TGCATACGCG CGGCATGCAG TACAACCCCG TAACCGGCCG CTATTGGCTG
AGCGGGGATA CCGATGTGAA TTACCTGTTC GCTACCAGGC GACCCACTGC ATGA
|
|---|
| Protein sequence | MTVSVNADPA ELAKFSELAH RWWDPDSEFR PLHQINPLRL DWINQLSPLE GRKVLDVGCG
GGILSDSMAR KGAEVTGIDL ASKALRVARL HALEAETPRV QYREISVEEL ANECPGSFDT
VTCMEMLEHV PDPQSVVAAC ARLVKPGGWV FFSTINRNAK AFALAIVGAE YLLKMLPQGT
HEYAKFIRPS ELASACRQAG LDVLHTRGMQ YNPVTGRYWL SGDTDVNYLF ATRRPTA
|
|---|
| |