Gene Dtpsy_1397 details

Gene Information

• Locus tag: Dtpsy_1397
• ID: 7382649
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 1466099
• End bp: 1466755
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643654715
• Product: OmpA/MotB domain protein
• Protein accession: YP_002552861
• Protein GI: 222110597
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAAC TGAACAAAGT GGCGATGTTG TTGGCCTCTG CTGTGCTTGC TACCTCGGCT 
GTTGCTCAAG TGAAGGCGGC AGACGGCGGT AAGGTCATCG ATAACTGGCA AAACGGCTCG 
GGTGAGCTGG TCTGGAAGAA CGGCACGAAT GAACTGTGCT GGCGCGACGC CAACTGGACC 
CCCGCAACCG CTGCCGAAGG TTGCGACGGC GCTCTGGTGA AGGCTGCTGC TCCTGCTCCC 
GCAGCTGCAC CCGCTCCCGC AGCCGCAGCT CCTGCCGCTC CTGCCCCCGC ACCTGCTATC 
GCTAGCAAGG TGACCTATGC AGCCGACGCT TTCTTCGACT TCGACAAGTC CGTCCTCAAG 
CCCGAAGGCA AGGCCAAGTT GGACGACCTG GTTTCCAAGG TCAAGGGCAT CAACCTGGAA 
GTGATCATTG CCGTGGGTCA CACCGACTCC ATCGGTACCG ACGCATACAA CCAGAAGCTG 
TCCGTGCGTC GCGCTGAAGC CGTGAAGGCT TACTTGGTGT CCAAGGGCAT CGAAAAGAAC 
CGCGTCTACA CCGAAGGGAA GGGCGAAAAG CAGCCCGTGG CGGACAACAA GACCAAGGAA 
GGTCGCGCCA AGAACCGCCG CGTGGAAATC GAAGTGGTTG GTACCCGCGC CAACTGA 

 

Protein sequence

MKKLNKVAML LASAVLATSA VAQVKAADGG KVIDNWQNGS GELVWKNGTN ELCWRDANWT 
PATAAEGCDG ALVKAAAPAP AAAPAPAAAA PAAPAPAPAI ASKVTYAADA FFDFDKSVLK 
PEGKAKLDDL VSKVKGINLE VIIAVGHTDS IGTDAYNQKL SVRRAEAVKA YLVSKGIEKN 
RVYTEGKGEK QPVADNKTKE GRAKNRRVEI EVVGTRAN