| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1378 |
|---|
| Symbol | |
|---|
| ID | 7382630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 1441019 |
|---|
| End bp | 1441591 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643654696 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_002552842 |
|---|
| Protein GI | 222110578 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5631] Predicted transcription regulator, contains HTH domain (MarR family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAG CCGCCAGACC CAAGTCCCCG GCCCCCGCTG CCACTGCCAA GGTGGGCAAG
GCCGCCAAGG CGCGCGGGCC CATCGTGTCG TCCGCGCATC TGGTGTCGGA CCGCAGTGCG
GAGATGAGCG AGTTCGAGTT CGGCCTCATC GTCGCGGGCA ATGCGTTCCA CCGCTGGGTG
GTGCACTGCA TGGCCGCGGC CGGTCTGCGC GACCTCACGC CGCTGGACGT GGTGGTGCTG
CACCATGTGA CGCACCGCGC ACGCGACAAG CGGCTGGCCG ACATCTGCTT CATCATGAAC
GTGGAAGACA CGCACGTGGT GAACTACTCG CTCAAGAAGC TGCTGGCGCT GGGCGTGGTG
GCCTCCAGCA AGAACGGCAA GGACGTGACC TACGCCGCCA CCGAGGCGGG GCGCGCCCAT
GTGCAGCGCT ACCGTGAGAT CCGCGAGAGC TGCCTGATCG ATGCGCTGAA TGCCGACGAC
GGCCTGAACC GCGACATTGG CGAGCTGGCG CGCCTGCTGC GCGTGCTGTC CGGCATGTAC
GACCAGGCGG CCCGTGCCGC GGCGTCCATG TGA
|
|---|
| Protein sequence | MTAAARPKSP APAATAKVGK AAKARGPIVS SAHLVSDRSA EMSEFEFGLI VAGNAFHRWV
VHCMAAAGLR DLTPLDVVVL HHVTHRARDK RLADICFIMN VEDTHVVNYS LKKLLALGVV
ASSKNGKDVT YAATEAGRAH VQRYREIRES CLIDALNADD GLNRDIGELA RLLRVLSGMY
DQAARAAASM
|
|---|
| |