Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1377 |
Symbol | |
ID | 7382629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 1439838 |
End bp | 1440815 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643654695 |
Product | TRAP dicarboxylate transporter- DctP subunit |
Protein accession | YP_002552841 |
Protein GI | 222110577 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGTC GAAACCTTGC CGCCGTTGCA CTGGCTGCCC TCACCGGCCT GTGCGCCCCC GCCCTGCATG CCCAGACCAA GTGGGACCTG GCCGCCGCCT ACCCGGCCAC CAATTTCCAC ACGGAGAACC TGGCGCAGTT CATCAGCGAC GTGGACAAGG GGTCAGGAGG CAAGCTCAAG ATCACGCTGC ATGCCAACGC CGCACTGTTC AAGGCGCCCG AGATCAAGCG CGCCGTGCAG GGCGCGCAGG CGCAGCTCGG CGAGATCCTG CTCGCCAACT TCCAGAACGA ATGGCAGATC TTCGGCGTGG ACGGCCTGCC CTTCCTGGCC GACAGCTACG ACGCGTCGAT GAAGCTGTAC AAGGCGCAAA AGCCGTTCCT GGAGAAGAAG CTGGCCGAGC AAGGCATGGT GCTGCTGTAC GCCGTGGCCT GGCCGCCACA GGGCATCTAC ACCAAGAAGC CCGTGAACAA CGCCGCCGAC CTGAAGGGCA TCAAGTGGCG CGCCTACAGC CCCGCCACCG CGCGCATCGC CGAGCTGGTG GGCGCGCAGC CGGTGACGGT GCAGGCCGCC GAGTTCTCGC AAGCGCTCGC CACCGGCGTG GTGGAGTCCA CCATGACCTC GGGCGCGACG GGCGTGGACA GCAAGCTCTA CGAGCACCTC AAGTATTACT ACGACACCCA GGCCTGGCTG CCCAAGAACG CGCTCATCAT GAACAAGAAG GCGTTCGATG CGCTGGACAA GCCCGTGCAG GAAGCCGTGC TCAAGGCCGC CGCCGACGCG GAGACCCGCG GCTGGGCCGC CAGCCGCCGC GTGAACGAGG ACACATTGGC CAAGCTCAAG GCCGAGGGCA TGCAGGTAGT GCCGCCCAGC AGCCAGCTGA AGGCCGACAT GGCCAAGGTG GGCGACACCA TGCTCAAGGA ATGGCTGGAC AAGGCCGGGC CCGACGGCAA GGCGCTGATC GACGCCTACC GCAAGTAA
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Protein sequence | MKRRNLAAVA LAALTGLCAP ALHAQTKWDL AAAYPATNFH TENLAQFISD VDKGSGGKLK ITLHANAALF KAPEIKRAVQ GAQAQLGEIL LANFQNEWQI FGVDGLPFLA DSYDASMKLY KAQKPFLEKK LAEQGMVLLY AVAWPPQGIY TKKPVNNAAD LKGIKWRAYS PATARIAELV GAQPVTVQAA EFSQALATGV VESTMTSGAT GVDSKLYEHL KYYYDTQAWL PKNALIMNKK AFDALDKPVQ EAVLKAAADA ETRGWAASRR VNEDTLAKLK AEGMQVVPPS SQLKADMAKV GDTMLKEWLD KAGPDGKALI DAYRK
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