| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1375 |
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| Symbol | |
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| ID | 7382627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1437969 |
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| End bp | 1439273 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643654693 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_002552839 |
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| Protein GI | 222110575 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACC TTGCCATCAC CGGCCTGTTG ATCCTGTCGC TGTTCCTGAT CCTGGGCAGC
GGCGTGTGGA TCGGGCTCAC GCTCTCGGGC GTGGCCTGGA TCGGCATGCA ATTGTTTTCC
TCGCGCCCCG CGGGCGACGC CATGGCGGTG ACCATCTGGG GCTCCTCGTC GAGCTGGACG
CTCACCGCCC TGCCCCTCTT CATCTGGATG GGCGAGATCC TGTTTCGCAC GCGGCTGTCG
CAAGACATGT TCAAGGGCCT GGCCCCGTGG GTGCAGGGCC TGCCCGGGCG GCTGCTGCAC
ACCAACGTGG TGGGCTGCAC CATCTTTGCC GCCGTGTCGG GGTCCAGCGC CGCCACCTGC
GCCACCATCG GCAAGATGAC GCTGCCCGAG CTCACGCGCC GCGGCTACCC CGAGAAGATG
GTTATCGGCA CGCTGGCCGG CGCCAGCACG CTGGGCCTGC TGATCCCGCC CTCAATCATC
ATGATCGTCT ACGGTGTGAC GGCCGAGGTA TCGATCTCCA AGCTGTTCAT TGCCGGCGTG
CTGCCCGGGG TGCTGCTGGC CGCGCTGTTC TCGGGCTACA TCATGTTCTG GGCATTGCGC
CACCCCGACC AGGTCCCAGC GGCCGATCGG CAGATGGGCC TGCTGGACAA GCTGCGCGAA
TCGCGCGCGC TGATTCCCGT GGTGCTGCTC ATCGCCGCGG TGCTGGGCTC CATCTACACG
GGCATCGCCA CCGCCACCGA AGCCGCGGCC GTGGGCGTGG TGGGCTCGCT GGTGCTGTCC
GCGGCGCAGG GGTCGCTGAA CTGGGCGAGC TTTCGCGACG CGCTCATGGG CGCCACGCGG
CTGTACTGCA TGATCGCGCT GATCCTCGCG GGCGCGGCCT TCCTCACGCT GGCCATGGGC
TACATCGGCC TGCCACGGCA CCTGGCGGAA TGGATCTCTT CGCTGGGGCT GAGCCAGGCG
CAACTGGTGG TGGCGCTGGC CGTGTTCTAC ATCGTGCTGG GCTGCTTCCT GGACGGCATC
TCCATGGTGG TGCTGACCAT GGGCGTGCTG ATGCCCACAG TGAGCGCAGC GGGCATCGAC
CCCATCTGGT TCGGCATCTT CGTCGTGCTG GTGGTGGAGA TGGCGCAGAT CACCCCACCC
GTGGGCTTCA ACCTGTTCGT GCTGCAGGGC ATGACGGGCA AGCAGCTACC GTGGATCGCC
CGCGTGGCCG CTCCCATGTT CCTGCTGATG TGCGCGGCCG TCACGCTGAT CTATGTGTTT
CCGGGCATCG TGACCTGGCT CCCGCAGCAA ATGACGGCGC GCTGA
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| Protein sequence | MSDLAITGLL ILSLFLILGS GVWIGLTLSG VAWIGMQLFS SRPAGDAMAV TIWGSSSSWT
LTALPLFIWM GEILFRTRLS QDMFKGLAPW VQGLPGRLLH TNVVGCTIFA AVSGSSAATC
ATIGKMTLPE LTRRGYPEKM VIGTLAGAST LGLLIPPSII MIVYGVTAEV SISKLFIAGV
LPGVLLAALF SGYIMFWALR HPDQVPAADR QMGLLDKLRE SRALIPVVLL IAAVLGSIYT
GIATATEAAA VGVVGSLVLS AAQGSLNWAS FRDALMGATR LYCMIALILA GAAFLTLAMG
YIGLPRHLAE WISSLGLSQA QLVVALAVFY IVLGCFLDGI SMVVLTMGVL MPTVSAAGID
PIWFGIFVVL VVEMAQITPP VGFNLFVLQG MTGKQLPWIA RVAAPMFLLM CAAVTLIYVF
PGIVTWLPQQ MTAR
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