Gene Dtpsy_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1372 
Symbol 
ID7382624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp1435294 
End bp1436481 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content73% 
IMG OID643654690 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002552836 
Protein GI222110572 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACCTGG CGCTCGCGCG GCTGATCGCC GGCCAGATCT GCATCCACGC CAGCATGGCG 
GGCATGCGCA TGGCCGCGCC GCTGCTGGCG CTGCGCGAGG GCTACAGCGC GGCGGCCGTG
GGTGTGCTGC TGGCGCTGTT CGCGCTCACG CAGGTGTTCC TGGCGCTGCC CGCGGGGCGC
TATGCCGACC GCCATGGGCT CAAGCGCCCG GTGCGCCACG CGGTCGTCGC GGCCGTCCTG
GGTGCCGGCG CGGCGCTGGT GTGGCCGACG TTTGCGGTGC TGTGCGCTGC GGCACTGCTC
ACCGGTGGCG CCACGGGGGC TGCCACGATC GCCTTGCAAC GCCACGTGGG CCGCGCCGCG
CACGGCGGCA CGCAGCTGCG CCAGGTCTTC AGCTGGCTGG CCATCGGGCC GGCGGTGTCC
AACTTCGTGG GCCCGTTCTG CGCGGGGCTG CTGATCGATC ACGCGGGTGC ACAGGCGGGC
GCGACCACGG GCTTTCGCGC GGCCTTCGCG CTCATGGCGG TATTGCCGTT GGCCACCTGG
TTCTGGGTGC GCGGCACGCA GGAGATGCCG CCGGTGGTGG CCGCGGAGGA CGGCACGCGC
GCGCGGGCCT GGGACCTGCT GGCCGAGCCC GGCTTTCGGC GGCTGCTCAT CGTGAACTGG
CTGCTGTCGT CGTGCTGGGA CGTGCACACC TTCGTGGTGC CGCTGCTGGG GCATGAGCGG
GGGCTGTCGG CCTCGGTGAT CGGCTCCATC CTCGGCGCGT TCGCGATTGC CGCCGCGGTG
ATCCGCGTGC TCATGCCGCT GGTGGCCGAC CGGCTGCGCG AATCCACCGT GGTCACCGGC
GCCATGGTGG CGACGGCACT GCTGTTCGCG GTCTATCCGC TGCTGCCGAC GGCCGTGACG
CTGGGAGCGT GCTCGGTGCT GCTGGGGTTC GCGCTGGGCT CGGTGCAGCC CATGATCATG
AGCATGCTGC ACCAACTCAC GCCCGCGCAC CGCCATGGCG AGGCGCTGGG TCTGCGGCTG
ATGGCGATCA ACGGCTCCAG CGTGGTGATG CCGCTGCTGT TTGGCACCGC GAGCGCGCTG
GTAGGGCTGA GTGGCCTGTT CTGGGCCGTG GGCGCCACTG TGGGGCTGGG TGCGCGCGTG
GCCTGGCGGC TGCGCGGCGA GGCGCCAGCC CCTCCGCCGC ATCCCTGA
 
Protein sequence
MNLALARLIA GQICIHASMA GMRMAAPLLA LREGYSAAAV GVLLALFALT QVFLALPAGR 
YADRHGLKRP VRHAVVAAVL GAGAALVWPT FAVLCAAALL TGGATGAATI ALQRHVGRAA
HGGTQLRQVF SWLAIGPAVS NFVGPFCAGL LIDHAGAQAG ATTGFRAAFA LMAVLPLATW
FWVRGTQEMP PVVAAEDGTR ARAWDLLAEP GFRRLLIVNW LLSSCWDVHT FVVPLLGHER
GLSASVIGSI LGAFAIAAAV IRVLMPLVAD RLRESTVVTG AMVATALLFA VYPLLPTAVT
LGACSVLLGF ALGSVQPMIM SMLHQLTPAH RHGEALGLRL MAINGSSVVM PLLFGTASAL
VGLSGLFWAV GATVGLGARV AWRLRGEAPA PPPHP