Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1355 |
Symbol | |
ID | 7382444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 1418385 |
End bp | 1419191 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643654673 |
Product | pseudouridine synthase |
Protein accession | YP_002552819 |
Protein GI | 222110555 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.420116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGACGCCCG CGCACCCTCC GCTGCGCCTG CTGTGGCAGG ACGCGCACAT GGTGGCCGTT TTCAAGCCGG CAGGCTGGCT GGTGCACCGC ACAGGACTGG ACGCGGGCGA AACGCGCTTC GTGATGCAGG CGCTGCGCGA CCAGATCGGC CAGCACGTCT ACCCCGTGCA CCGGCTGGAC AAGGGCACCT GCGGCGTGCT CGTCATGGCC CTGCACCCCG CCGCCGCGCG GGCCCTGGCC GACGCCTTCG CCCGGCATGC CGTGCGCAAG CAATACTTGG CGCTGGTACG CGGCTGGGCA CCGGCGCAGG CCGAAGTGGA CCACCCGCTG CGCCCCGACG ACGCGCCGCC CGATGCCCCC ACCCAGCCTG CCCACACGCG CCTCACACGC CTGGCGCGGC TGGAGCTGCC CGAGTCCAGC GACCCCCGCT TTGCCACGAC GCGCGCATCG CTGGTGCGGG CCGAGCCGAC CACGGGGCGC CGCCACCAAA TCCGCCGCCA CCTCAAGCAT CTGGCCCACC CCATCCTGGG TGACGCCACC CACGGCAAGG GGCCGCTCAA CCGTTGGTGG GCACAGCGCC TCGGCCTGCA CCGCCTGTGG CTGCATGCGT GGCAGCTCAG CCTGCCCCAC CCCGCAGACG GCCGCCTGGT CACGCTGCAC AGTGGATTGC AGTGGCCCGC TGCCAGAACA TCCACCACCG CCAGCGCACC CCCGCAGCCA AACGCGGACG CAGCGCCGGA TTGGCAGCAA CACATCTGGA CCCTGCCCTG GCAGCAGGAC ATCGAAGACG CGCTACCAAA AGAGTAG
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Protein sequence | MTPAHPPLRL LWQDAHMVAV FKPAGWLVHR TGLDAGETRF VMQALRDQIG QHVYPVHRLD KGTCGVLVMA LHPAAARALA DAFARHAVRK QYLALVRGWA PAQAEVDHPL RPDDAPPDAP TQPAHTRLTR LARLELPESS DPRFATTRAS LVRAEPTTGR RHQIRRHLKH LAHPILGDAT HGKGPLNRWW AQRLGLHRLW LHAWQLSLPH PADGRLVTLH SGLQWPAART STTASAPPQP NADAAPDWQQ HIWTLPWQQD IEDALPKE
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