| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1340 |
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| Symbol | |
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| ID | 7382429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1404669 |
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| End bp | 1406366 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643654658 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_002552804 |
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| Protein GI | 222110540 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.114748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCACA CCGCTACCTC CACCGCCGCA TCTCGCACGG GCGGGCAGAT CCTCGTCCAG
CAGCTCATCG TGCACGGCGT GCAGCAGCTC TTTTGCGTGC CGGGCGAGAG CTACCTGGCC
GTGCTGGACG CCCTGCACGA CGCCAACATC GCCGTCACCG TGTGCCGCCA GGAGGGCGGC
GCGGCCATGA TGGCCGAGGC GCAGGGCAAG CTGACCGGCC GCCCGGGCAT CTGCTTCGTG
ACGCGCGGGC CGGGGGTTAC CAACGCATCG GCGGGCATCC ACATCGCGCA CCAGGATTCG
ACGCCGTTGA TCGTCTTCGT AGGCCAGGTG GCGCGGGGTG CGCTGGGGCG CGAGGCGTTC
CAGGAGCTGG ACTACGGCGC CGTGTTCGGC ACCATGGCCA AGTGGGTGGT GCAGATCGAC
GATGCGCGGC GCGTGCCGGA GCTGGTCTCG CGCGCATTCC ACGTCGCCAC CTCGGGCCGC
CCCGGCCCCG TGGTGGTGGC CCTGCCCGAG GACATGCTGA CCGATGCCGT GCAGGTGGCC
GATGCCCTGC CCTACACCAT GCCCGAGACC TACCCCGGCG CGCCCGCACT GCAGGCACTG
GCGGCGCGGC TGCAGGCGGC CGAGCGGCCG GTGGTCATCG TGGGCGGCAG CCGCTGGTCC
GACCAGGCGG TGCGCGACAT GCAGGCCTTT GCCAGCACCT GGCGGCTGCC GGTGTATTGC
TCGTTCCGCC GGCAGATGCT ATTCCCGGCC AACCACGCCA GCTACGCGGG CGACCTGGGC
CTGGGCGTCA ACCCCCAGCT GCTGGCGCGC ATCCGCGCGA GCGACCTGGT GCTGGTGCTG
GGCGGGCGGC TGTCGGAGAT CCCCTCGCAG GGCTACGAGC TGTTCGACAT TCCCGTGCCG
GCGCAGCCGC TGGTGCATGT GCATGCCGAC GCCGACGAGC TCGGCCGGCT CTACCGCCCG
GTGCAGGCCA TCCACGCCAC GCCGCAGGCC ATGGCCGCCG CCCTGGCCAG CCTGCGCCCC
GCGGCCGAGC CGCGCTGGAC CGCGCACACC GAGGCTGCGC GCGCCGAGTA CCTGGCCTGG
AGCGACCCGG CGCCCATCCG CATCCCCGGC AAGCTGCAGA TGGGCGAGGT GATGCAGCAC
CTGCGCGCGG TGCTGCCCGC CGACACCATC TTCTGCAACG GCGCGGGCAA CTTCGCCACC
TGGGTGCACC GCTTCTGGCC GTTCACCACC TATGCGAGCC AACTGGCCCC CACCAGCGGC
TCGATGGGCT ACGGCCTGCC GGCCGGCGTG GGCGCCAAGC GCCTGTGGCG CGAGCGCGAG
GTGGTGGTGT TTGCGGGCGA CGGCGACTTT CTGATGCATG GCCAGGAGTT CGCCACCGCC
GTGCAGTACG GCCTGCCGCT GATAGTGGTG CTGTTGGACA ACGCCATGTA CGGCACCATC
CGCATGCACC AGGAGCGCGA GTACCCCGGG CGCATCAGCG CCACACAGCT CAAGAACCCC
GATTTCAAGG CCTATGCCCA GGCCTTCGGC GGGCACGGCG AGCGCGTGGA GCGCACCGAA
GACTTCGCCC CGGCACTGGC ACGCGCACGG GCGAGCGGGC TGCCCAGCGT GCTGCACTGC
CTGATCGATC CGCAGGCGAT CACACCCACG GGAACGCTGG ATGGCATCCG GTCGGCGGCG
ATGGCGCGCA AGGGGTGA
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| Protein sequence | MPHTATSTAA SRTGGQILVQ QLIVHGVQQL FCVPGESYLA VLDALHDANI AVTVCRQEGG
AAMMAEAQGK LTGRPGICFV TRGPGVTNAS AGIHIAHQDS TPLIVFVGQV ARGALGREAF
QELDYGAVFG TMAKWVVQID DARRVPELVS RAFHVATSGR PGPVVVALPE DMLTDAVQVA
DALPYTMPET YPGAPALQAL AARLQAAERP VVIVGGSRWS DQAVRDMQAF ASTWRLPVYC
SFRRQMLFPA NHASYAGDLG LGVNPQLLAR IRASDLVLVL GGRLSEIPSQ GYELFDIPVP
AQPLVHVHAD ADELGRLYRP VQAIHATPQA MAAALASLRP AAEPRWTAHT EAARAEYLAW
SDPAPIRIPG KLQMGEVMQH LRAVLPADTI FCNGAGNFAT WVHRFWPFTT YASQLAPTSG
SMGYGLPAGV GAKRLWRERE VVVFAGDGDF LMHGQEFATA VQYGLPLIVV LLDNAMYGTI
RMHQEREYPG RISATQLKNP DFKAYAQAFG GHGERVERTE DFAPALARAR ASGLPSVLHC
LIDPQAITPT GTLDGIRSAA MARKG
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