| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1324 |
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| Symbol | |
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| ID | 7382413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1383948 |
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| End bp | 1384937 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643654643 |
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| Product | P-type conjugative transfer protein TrbG |
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| Protein accession | YP_002552789 |
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| Protein GI | 222110525 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.141371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGT CTTTCCGCTT TTACGCTTTT GTGCTGACCT TGGCGGCCCT GTCGGGCTGC
GCCTCGCAGG GCAAGCCACC GCCACGCATC TCGCTCGATG AGCCGGTGCT GGCGCAGCCG
TTGCCCGAAC CACCGAAGCC GGTGGAAGTG GTGGAGGTGC CGAAGGTGCT GCCGATGCCG
GCGCAGATGA AGCCGCTGCC TGACGTGGAC GAAGACAAGC CCACGCCAGA GCCTGTCGAC
GAAACCGTGC GCGTCTCGCG TGCCAACGCC GAGGCGCGCA TCGCGCCGAC TCGCGAGGGC
TATGTCAACG CGATTCAGGT GTGGCCTTTC ACTGATGGCG CGCTGTATCA GGTCTACGCC
GCGCCGGGGC GCGTCACCGT CGTGTCCCTA CAGCCGGGCG AGGAACTGGT GACGGTCGCC
GCCGGCGACA CGGTGCGCTG GATTGTTGGC GATACGTCCA GCGGCGCCGG CGCCGAGCTG
CGCTTCAACG TGCTGGTGAA GCCCACCCGG TCGGGCCTCA AGACCAATCT AGTCGTCACC
ACGAACCGCA GGACATACCT GCTGGAACTG ACCTCGACGG AAAAAGCGTG GATGGCATCG
GTGTCTTGGG ACTATCCGAA AGACCGGATG TTGGCCTTGC AGCGCCAGTC GCAGACCGCG
CAGGCGACCG CGCCGGTCGA TACGGGCTTG TCGCTGGAGA AGATTCGCTT CCGCTATGCG
GTCAGCGGCA GCAATCCACC GTGGAAGCCA TTGCGCGCTT TCGACGACGG CGAGAAGGTC
TATATCCAGT TCCCGGGAGG CATCGCGCAG GGCGAGTTGC CTCCCTTGTT CGTGATCGGC
GCGCAGGGCG ACGGGCAACT GGTGAACTAC CGCTTCCGCT CACCGTACTA CATCGTGGAT
CGGCTGTTCG GCGCGGCCGA ACTTCGCCTG GGCGGGGACA AGGGCGACGT GGTGCGCATC
GAGCGCACGG ATGGCACGCG GGGGAAATGA
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| Protein sequence | MNLSFRFYAF VLTLAALSGC ASQGKPPPRI SLDEPVLAQP LPEPPKPVEV VEVPKVLPMP
AQMKPLPDVD EDKPTPEPVD ETVRVSRANA EARIAPTREG YVNAIQVWPF TDGALYQVYA
APGRVTVVSL QPGEELVTVA AGDTVRWIVG DTSSGAGAEL RFNVLVKPTR SGLKTNLVVT
TNRRTYLLEL TSTEKAWMAS VSWDYPKDRM LALQRQSQTA QATAPVDTGL SLEKIRFRYA
VSGSNPPWKP LRAFDDGEKV YIQFPGGIAQ GELPPLFVIG AQGDGQLVNY RFRSPYYIVD
RLFGAAELRL GGDKGDVVRI ERTDGTRGK
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