| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1322 |
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| Symbol | |
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| ID | 7382411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1381843 |
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| End bp | 1383222 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643654641 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_002552787 |
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| Protein GI | 222110523 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGACG TGACCATCAT CGACCAATTC CTCGCCACAT TCGCCGCCTA CATCGACTCG
GGTTTCGGAC TGCTGCGGGG CGAAGTGGCG TTCCTCACAG CCACGTTGAT CGTCATCGAC
ATGACGATCG CCGGCCTGTA TTGGGCCATG AGCCACGCTA CCGGCCAAGG CGAGGACGTG
ATCGCCAAGC TGCTGCGCAA GGTGCTCTAC GTCGGTGCCT TCGCCTACAT CATCAACAAC
TTCAACTGGC TGGCCAGCAT CGTGTTCCGC TCGTTTGCGG GATTGGGCAT CACCGCCACC
GGCTCGGCCA TCACGATGGA GAACTTCTTG CAGCCGGGCC GGCTGGCGAA AACCGGCATC
GACGCCGGGG CGCCGATTCT GGAGCAGATC GGCGAGATGG CAGGCTTTCC CGAAGTGTTC
GTGAACCTCG ACCCCATCGT GGTGATGTTC CTCGCCTGGC TGGTCGTGGT GCTGTGCTTC
TTCGTGCTGG CAATCCAGCT TTTCATCACG CTGATCGAGT TCAAGCTGAC CACGCTCGCC
GGATTCGTGC TGGTGCCGTT CGCGCTCTGG AACAAGACCG CGTTCCTCGC CGAAAAGGTC
TTGGGCAACG TGGTGGCCTC CGGCGTCAAG GTTCTGGTAC TGGCCGTGAT CGTCGGTATC
GGCTCGGGCT TGTTCGCTCA GTTCCAAGTC CATCCTGCCG AGCCGTCTAT CGACCACGCG
CTGGTCATCA TGCTGGCCTC GCTCACCTTG CTGGCGCTCG GGATCTTTGG CCCCGGCATC
GCCACCGGCC TTGTGTCCGG TGCGCCGCAG CTCGGCGCGG GCGCGATGGC TGGTGCTGCT
GTCGGCGCTG CCGGCACGGC CGTTGTCATC GGTGCCGCCG CGACGGGCGT GGGTGGCGCC
GTGGCTGCTG GCGCGCGCAT GGCCCCGGCT GCCGCAAAGC TGGCCGGTAG CGGTGCGCGC
GCCGCAACGT CGGCGGCCAG CAGTGCGAAG TCGACGTTTC AGGCCGGTTC CGCCGCCGCT
GGCGGCGCCG CAAAGGGCGC GATGGCGGGC CTGGGCAACG TCGCCAAGAC CGGCGCGCAG
TCCGCCGGAC GCGCCGCAGC GTCCCGTGCT TCCGCTGCCG GGCAGCGGAT GGCCGCTCCG
TTCCGTGCTG GCTGGAATGG CACGACGGCC GACGCTGGCG CGTCAACCGG CCAAGCCTCC
GCAGGAGAAG CCCCCGCAGG CGGCGCCGCT GCACAGAAGC CGGAACAACC CGCCTGGGCC
AAGCGGCTGC ATCGCCGCCA GCAACTCACC CACGCCGCGA CCACCGCCGC GCACACGCTG
CGCGGTGGCG ACGGTGGCGG CTCGGGGCAA GGCCCGAGCC TGCGCGGCTC CGACGACTAA
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| Protein sequence | MNDVTIIDQF LATFAAYIDS GFGLLRGEVA FLTATLIVID MTIAGLYWAM SHATGQGEDV
IAKLLRKVLY VGAFAYIINN FNWLASIVFR SFAGLGITAT GSAITMENFL QPGRLAKTGI
DAGAPILEQI GEMAGFPEVF VNLDPIVVMF LAWLVVVLCF FVLAIQLFIT LIEFKLTTLA
GFVLVPFALW NKTAFLAEKV LGNVVASGVK VLVLAVIVGI GSGLFAQFQV HPAEPSIDHA
LVIMLASLTL LALGIFGPGI ATGLVSGAPQ LGAGAMAGAA VGAAGTAVVI GAAATGVGGA
VAAGARMAPA AAKLAGSGAR AATSAASSAK STFQAGSAAA GGAAKGAMAG LGNVAKTGAQ
SAGRAAASRA SAAGQRMAAP FRAGWNGTTA DAGASTGQAS AGEAPAGGAA AQKPEQPAWA
KRLHRRQQLT HAATTAAHTL RGGDGGGSGQ GPSLRGSDD
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