| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1316 |
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| Symbol | |
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| ID | 7382405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1375630 |
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| End bp | 1377642 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643654635 |
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| Product | TRAG family protein |
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| Protein accession | YP_002552781 |
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| Protein GI | 222110517 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGGGA CGAACGTGCT GTTCGGTCAG ATCGCCGTGG TATTCGGCAT CGTGATCGCC
GGAGTGTGGA GCGCCACACA ATGGACAGCA GCAGCCCTTG GCTATCAGCT ACGCCTTGGC
TCGCCCTGGT TCGATCTTCT CGGCACACCG ATCTACCACC CCTGGAAGCT GTTCGAGTGG
TGGTTCTTCT TCGATGCCTA CGCACCCCGC GTCTTTGACA CGGGCGGGGC CATCGCGGGC
GGCAGCGGCC TGGTGGCCGT GCTGGTCGCT ATCGGCATGT CAATCTGGCG CTCGCGGCAG
TCGCGCCTGG TCACGACCTA CGGTACGGCA CGCTGGGCGA ATGCGCAGGA TATTCGCAAG
GCCGGCCTCA CGCAGCCGAC CGGCGTGTTC CTCGGCCAGC ATGATCGCCA ATACCTGCGC
CACGAAGGTC CGGAACACGT CCTGACCTTC GCGCCCACGC GCTCGGGCAA AGGCGTCGGG
CTGGTCGTTC CCACGCTGCT TTCGTGGCCC ACGTCGGCCG TCATCCACGA CATCAAGGGC
GAGAACTGGC AGATCACCGC AGGTTGGCGC TCGCGCTTCT CGCACTGTCT GTTGTTCAAC
CCCACTGATG CAACGTCAGC AGCCTACAAC CCGCTACTGG AGGTACGTCG CGGCGCGAAT
GAGGTGCGCG ACGTGCAGAA CATCGCGGAC ATTCTGGTTG ACCCCGAAGG TGCGCTGGAG
AAGCGCAACC ATTGGGAAAA GACTTCGCAT GCGCTGCTGG TCGGCGCGAT CCTGCATGTG
CTGTACGCGG GCGAAGACAA GACGCTACGA GGTGTGGCGA ACTTCCTCAG TGACCCGGCG
TGCCCATTCG AGCTGACCTT GCACCGGATG ATGACCACGC CGCACCTGGG CGATGGCCCG
CATCCCGTGG TTGCATCAGC GGCGCGCGAA GTGCTCAACA AGAGCGACAA CGAACGGTCT
GGCGTTCTCT CCACGGCCAT GTCGTTCCTT GGCCTTTACC GTGACCCCAC GGTGGCCGAA
GTCACCTCGC GCTGCGACTG GCGCATCGCC GACCTGATCG CTGCCGAGCA TCCGGTATCG
CTGTACCTCG TGGTGCCGCC TTCGGACATT AGCCGCACCA AGCCGCTGAT CCGCCTGATC
CTCAACCAGA TCGGCCGACG GCTGACCGAA TCGCTCGACG GGTCGGATGG CATCGAACGC
CGCCACAAGC TGCTGCTGAT GCTGGATGAG TTCCCGGCGC TGGGGCGCCT GGACTTCTTC
GAGACGGCGC TGGCCTTCAT GGCGGGCTAC GGCATCCGCA GCTTTCTCAT CGCGCAATCA
CTCAACCAGA TTGACAAAGC CTACGGCCAA AACCATTCCA TCCTCGACAA CTGCCATGTC
CGAGTGACGT TCGCAACCAA CGACGAACGC ACGGCCAAGC GTATTTCCGA AACCCTGGGA
ACGGCCACCG AGCTGCGCGC GCAGCGCAAC TACGCCGGCC ATCGGCTCGC GCCATGGCTC
GGGCACCTCA TGGTGTCGCG GCAGGAAACG GCACCACGTG CCGCTGCGCA CGCGCCAGGG
CGTGGTGTCC ATGACCGATC TGGTGCGTTC CTCGATGCGC CTGCGCCCGG ATCGCGTCGT
GGTGGGCGAG GTGCGCGGCC CCGAGGCGCT GGATCTCATC AAGGTCTGGG GCACGGGTCA
CCCCGGCGGT ATCGCCACGA TCCATGCCGG CTCCGCCTTG GGCGCGCTGC TGCGCCTGGA
GCAACTGATT CTCGAAGTGG CCGCGAACCC GCCGCGTGCG CTGATCGCCG AGGCGGTCAA
CGTGGTGATC CACATTGCCG GGCGCGGGCG CAAGCGCCGC ATCGAGAGCA TCGCCCGCGT
CGTCGGCTTC GACGGCGTGG GCTACCGATT GGTGGACGGT TTGGCGGACG CGATGGACAC
GCCGTTTCCC GAGCTACCGC CCGTTTCCGA TGCCGCGCCC GCTGCGGCGA CTTCCCCATC
CCGTCCCTCA ATCCCTCTGG AGAACTGCCA TGA
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| Protein sequence | MQGTNVLFGQ IAVVFGIVIA GVWSATQWTA AALGYQLRLG SPWFDLLGTP IYHPWKLFEW
WFFFDAYAPR VFDTGGAIAG GSGLVAVLVA IGMSIWRSRQ SRLVTTYGTA RWANAQDIRK
AGLTQPTGVF LGQHDRQYLR HEGPEHVLTF APTRSGKGVG LVVPTLLSWP TSAVIHDIKG
ENWQITAGWR SRFSHCLLFN PTDATSAAYN PLLEVRRGAN EVRDVQNIAD ILVDPEGALE
KRNHWEKTSH ALLVGAILHV LYAGEDKTLR GVANFLSDPA CPFELTLHRM MTTPHLGDGP
HPVVASAARE VLNKSDNERS GVLSTAMSFL GLYRDPTVAE VTSRCDWRIA DLIAAEHPVS
LYLVVPPSDI SRTKPLIRLI LNQIGRRLTE SLDGSDGIER RHKLLLMLDE FPALGRLDFF
ETALAFMAGY GIRSFLIAQS LNQIDKAYGQ NHSILDNCHV RVTFATNDER TAKRISETLG
TATELRAQRN YAGHRLAPWL GHLMVSRQET APRAAAHAPG RGVHDRSGAF LDAPAPGSRR
GGRGARPRGA GSHQGLGHGS PRRYRHDPCR LRLGRAAAPG ATDSRSGREP AACADRRGGQ
RGDPHCRARA QAPHREHRPR RRLRRRGLPI GGRFGGRDGH AVSRATARFR CRARCGDFPI
PSLNPSGELP
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