| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1311 |
|---|
| Symbol | |
|---|
| ID | 7382400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 1370404 |
|---|
| End bp | 1370967 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643654630 |
|---|
| Product | UspA domain protein |
|---|
| Protein accession | YP_002552776 |
|---|
| Protein GI | 222110512 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.519886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATTCCC GATTTCTGGT GCCGCTGGAC GGCAGTCCCA CATCCTTCCT GGCGCTCGAT
CATGCGGCAG AACTGGCACG CCTGAGCGGC GCCACCGTGA TCTTGCTGCA TATCGTCGAA
CCAACCCGCC ACAGCACGGG TTTCGAACGT CCCGAGGTCT ACATCAAGGA TGTCCGCCCA
CGCTTCCTCG AAGCCGGCCA GGCGTTGCTG GATGAAGCTG CGAGTCGGCT TCGTCGGAAC
GGAATTGCCA CAGAGACGGT GCTGCTTGAG AGCGGCACCG CACGCGTGTC GGAACAGATC
GCACAGCAGG CCGAGGTGAG CGATTGCGAC TTGGTCATCC TGGGCACCCA TGGGCGTCGC
GGCATGAACC GGCTGCTGCT GGGCAGCGAT GCAGAGCAAG TGGCGCGCAT CGCACCAGTT
CCGGTAATGC TGGTGCGCCA GTCGAGCCGA GATGGTGACC AGACACGCTC AGCCGCACGG
ACGCCAGTCG AGGCCAGCGA CAACGCCGGT ACGCAACGCC GGCATCCAAC TCGCGCAAAC
AAGCTAAAAA AACCACATGA ATGA
|
|---|
| Protein sequence | MYSRFLVPLD GSPTSFLALD HAAELARLSG ATVILLHIVE PTRHSTGFER PEVYIKDVRP
RFLEAGQALL DEAASRLRRN GIATETVLLE SGTARVSEQI AQQAEVSDCD LVILGTHGRR
GMNRLLLGSD AEQVARIAPV PVMLVRQSSR DGDQTRSAAR TPVEASDNAG TQRRHPTRAN
KLKKPHE
|
|---|
| |