Gene Dtpsy_1256 details

Gene Information

• Locus tag: Dtpsy_1256
• Symbol: smpB
• ID: 7383160
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: -
• Start bp: 1319687
• End bp: 1320160
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643654577
• Product: SsrA-binding protein
• Protein accession: YP_002552723
• Protein GI: 222110459
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0547561
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAAGA AACCTGACAC ATCGTCCCGC ATCGCCGACA ACAAGAAGGC GGCATACAAC 
TATTTCTTTG AAGAGCGCTA CGAAGCGGGG CTGGTGCTGC ACGGCTGGGA GGTCAAGGCA 
CTGCGCGAGG GCAAGGTGCA GCTTACCGAC GGCTACGTGA TCATCAAAGA TGGTGAGCTG 
TTTCTCATCG GCTGCCAGAT CAACCCGCTC AAGACCGCGT CCACGCACGT CAGCCCCGAC 
GCGGCGCGCA TCAAAAAGCT GCTGATGCAC AAGGACGAGA TCCGGCGCCT GATCGGCAAG 
GTCGAGCAAA AAGGCTACAC CCTGGTGCCG CTGAATCTCC ACTGGAAAGA CGGCCGCGCC 
AAGTGCGAGA TTGCGTTGGC CAAGGGCAAG GCCGAGCACG ACAAGCGCGA CACCATCAAG 
GAGCGCGAAG GCAAGCGCGA GGTGGAACGC GTCATGAAGA GCCGCCACCG CTGA 

 

Protein sequence

MAKKPDTSSR IADNKKAAYN YFFEERYEAG LVLHGWEVKA LREGKVQLTD GYVIIKDGEL 
FLIGCQINPL KTASTHVSPD AARIKKLLMH KDEIRRLIGK VEQKGYTLVP LNLHWKDGRA 
KCEIALAKGK AEHDKRDTIK EREGKREVER VMKSRHR