| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1253 |
|---|
| Symbol | |
|---|
| ID | 7383157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 1317821 |
|---|
| End bp | 1318660 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643654574 |
|---|
| Product | putative transmembrane anti-sigma factor |
|---|
| Protein accession | YP_002552720 |
|---|
| Protein GI | 222110456 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0479785 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCCG ACCCTTTCAG CCCTTCGGAC GAGACGCATC TGCATGCTCT GGCGGACGAC
CGGCTGCCGC GCGCCCAGGC AGAGTCGCTG CACTCCCGCA TGGACTCCTC GCAGAGGCAG
CGTGCCGAAG CGTGGGCGCA ACAGCGTGCG CAGCTGCAGA CCCTGCACGC TGACTGGTTG
CGGCAGCCTG TGCCCAATGT GCTGGTACAG GCGGCAGAGC GCCTGCAAGA CGCAAACGAC
ACGCAACAGC ACTGGGCCCG TTGGGGCGGC TTTGCCGCGG GCTGGGTGCT GGCGTTCGGG
CTAGGCTGGA GCCTGCATGC GACGGACGGC AAACAAACCA CACTGGCCAC GGCCCCCCCG
CAACGGTTTG TGCAGCAGGC GGCCGTGGCG CACGCGGTCT ACCAACCCGA ACAGCGCCAT
CCTGTGGAAG TGGCGGCCGC GCAGCAGGAC CACCTGGTGC AGTGGCTGTC CAAGCGGCTG
GCGCGCCCGC TCACCGTGCC GCGGCTGCAG GCCGAGGGGT TCGAATTGAT GGGCGGGCGC
CTGCTGCCCG GCGGCAGCGG GGCGCGCGCG CAATTCATGT ACCAGAACGC CGCGGGCGCG
CGAATCACGC TGTACCTGGG CGCACTCGAC GGCCTACAGG CTGCGGCCGC ACAGACCACT
GCGTTCCAGT TCCACGACGA AGGGACCGTG TCCAGTTTCT ACTGGGTGGA CCAGGGTTTT
GGCTACGCCC TCAGCGGCGA ACTGCCGCGG CCCACGCTGC AGGCGCTGGC CACGGCGGTG
TACCAGCAAA TCAGCGCAGC GCCGCCAGCG GGTGCGCGTG CGCCGGCCAA GGGCTCTTGA
|
|---|
| Protein sequence | MKPDPFSPSD ETHLHALADD RLPRAQAESL HSRMDSSQRQ RAEAWAQQRA QLQTLHADWL
RQPVPNVLVQ AAERLQDAND TQQHWARWGG FAAGWVLAFG LGWSLHATDG KQTTLATAPP
QRFVQQAAVA HAVYQPEQRH PVEVAAAQQD HLVQWLSKRL ARPLTVPRLQ AEGFELMGGR
LLPGGSGARA QFMYQNAAGA RITLYLGALD GLQAAAAQTT AFQFHDEGTV SSFYWVDQGF
GYALSGELPR PTLQALATAV YQQISAAPPA GARAPAKGS
|
|---|
| |