Gene Dtpsy_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1250 
Symbol 
ID7383154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp1313860 
End bp1315689 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content64% 
IMG OID643654571 
ProductGTP-binding protein TypA 
Protein accessionYP_002552717 
Protein GI222110453 
COG category[T] Signal transduction mechanisms 
COG ID[COG1217] Predicted membrane GTPase involved in stress response 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0809475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAC AAATCCGCAA CATCGCCATC ATCGCTCACG TCGACCATGG CAAGACCACG 
ATGGTGGACC AACTGCTGCG CCAGTCCGGC ACCTTCGCCG AGCACGAGAA GGTCGTGGAC
ACCGTGATGG ACAGCAACGC CATCGAGCGC GAGCGCGGCA TCACCATCCT GGCGAAGAAC
TGCGCCGTGA GCTGGAACGG CACGCACATC AACATCCTGG ACACGCCCGG CCACGCGGAC
TTCGGCGGCG AGGTGGAGCG TGCCCTGTCG ATGGTGGACG GCGTGGTGCT GCTGATCGAC
GCGCAGGAAG GCCCCATGCC CCAGACGCGC TTCGTGACCA AGAAGGCGCT GGCGCTGGGC
CTCAAGCCCA TCGTGGTGGT CAACAAGGTG GACAAGCCCG GCGCGCGCCC CGACTACGTG
GTGAACGCCG CTTTCGACCT GTTCGACAAG CTGGGAGCCA CCGACGAGCA ACTGGACTTC
CCCGTGGTCT ACGCCTCGGG CATCAACGGC TGGAGCGCGC TGGAACAGGG CAACCCCGGT
GAGCAGTGGG GCCCCGACAT GTCGGCGCTG TTCGAGACCA TCCTCAAGCA CGTGCCGTCC
GTGAAGGGCG ACGCCACGGC GCCGCTGCAG ATGCAGGTTT CGGCGCTGGA CTATTCCACG
TTCGTCGGCC GTATCGGTGT GGGCCGTATC ACCCAGGGTA CGCTCAAGGC CGGGCAGGAT
GTGCTGGTCA TGGCCGGGCC GGATGGCGCC AGCTACAAGG GCCGCGTGAA CCAGATCCAC
CAGTTCCAGG GCCTTGACCG CGTGCAGGTG ACCGAAGCCG GCCCCAGCGA GATCGTGCTC
ATCAACGGCA TCGAGAACGT GGGTATCGGC GAGACCCTCA CCGACCCCGC CAACCCCCAG
CCGCTGCCCA TGCTGAAGAT CGACGAGCCC ACGCTGACGA TGAACTTCTG CGTGAACACC
TCGCCGCTGG CGGGCCGTGA AGGCAAATTC GTGACCAGCC GCCAGATCTG GGACCGCCTG
CAGAAGGAGC TGCGTTCCAA CGTGGCCCTG CGCGTCAAGG AAACCGACGA GGACGGCATC
TTCGAGGTGT CCGGCCGCGG CGAACTGCAC CTGACCATCC TGCTGGAAGA AATGCGCCGT
GAAGGCTACG AGTTGGCCGT CTCCAAGCCG CGCGTGGTGT ACCGCGACAT CGACGGCGAG
CGCTGCGAGC CTATCGAACT GGTGACTGCT GATATCGAGG AAGGCCACCA AGGCGGTGTG
ATGCAGGCCC TCGGCGAGCG CAAGGGTGAA CTGGTGAACA TGGAGCCCGA CGGCCGTGGC
CGCGTGCGCC TGGAGTACCG CATCCCGGCC CGTGGCCTGA TCGGTTTCAC CAACGAATTT
CTGAACCTGA CGCGCGGCTC GGGCCTCATC AGCAACATCT TCGACAGCTA TGAGCCGCAT
AAGGGCGACA TTGGCGGCCG CAAGAACGGC GTGCTGATTT CCATGGACGA TGGTGAAATT
TTTACCTACG CCCTGGGCAA GCTCGACGAC CGTGGCCGCA TGTTCGTGAA GGCAGGCGAC
CCGGTGTACG AAGGCATGAT CGTCGGCGTG CACAACCGCG ACAACGACCT GGTGGTGAAC
GCCACGCGTA CCAAGCAGCT CACCAACTTC CGCGTGAGCG GCAAGGAAGA CGCGATCAAG
ATCACGCCCC CGATCGACCT CACGCTGGAG TACGGTGTGG AGTTCATCGA GGACGATGAA
CTGGTGGAGA TCACGCCCAA GAGCATTCGC CTGCGCAAGC GCCACCTCAA GGAGCACGAG
CGCAAGCGCG CCAGCCGCGA AGGCGCGTGA
 
Protein sequence
MSKQIRNIAI IAHVDHGKTT MVDQLLRQSG TFAEHEKVVD TVMDSNAIER ERGITILAKN 
CAVSWNGTHI NILDTPGHAD FGGEVERALS MVDGVVLLID AQEGPMPQTR FVTKKALALG
LKPIVVVNKV DKPGARPDYV VNAAFDLFDK LGATDEQLDF PVVYASGING WSALEQGNPG
EQWGPDMSAL FETILKHVPS VKGDATAPLQ MQVSALDYST FVGRIGVGRI TQGTLKAGQD
VLVMAGPDGA SYKGRVNQIH QFQGLDRVQV TEAGPSEIVL INGIENVGIG ETLTDPANPQ
PLPMLKIDEP TLTMNFCVNT SPLAGREGKF VTSRQIWDRL QKELRSNVAL RVKETDEDGI
FEVSGRGELH LTILLEEMRR EGYELAVSKP RVVYRDIDGE RCEPIELVTA DIEEGHQGGV
MQALGERKGE LVNMEPDGRG RVRLEYRIPA RGLIGFTNEF LNLTRGSGLI SNIFDSYEPH
KGDIGGRKNG VLISMDDGEI FTYALGKLDD RGRMFVKAGD PVYEGMIVGV HNRDNDLVVN
ATRTKQLTNF RVSGKEDAIK ITPPIDLTLE YGVEFIEDDE LVEITPKSIR LRKRHLKEHE
RKRASREGA