| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1249 |
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| Symbol | truB |
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| ID | 7383153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1312862 |
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| End bp | 1313863 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643654570 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_002552716 |
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| Protein GI | 222110452 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0328015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAC GCGCTCCCCG CATCCGGGTG CAGCGGCGCC CGGTGCACGG AGTGCTGCTG
CTCGACAAAC CCCTGGGCCT GTCCAGCAAC GACGCCTTGC AGAAGGTGAA GTGGCTGCTG
CGCGCCGAGA AGGCTGGCCA CACGGGCACG CTGGACCCGC TGGCCAGTGG CGTGCTGCCG
CTGTGCTTTG GTGCCGCCAC CAAATTCAGC CAGTTGCAGC TGGAAGCGCC CAAGGCCTAT
GAAGCCGTCG CACTGTTGGG TACTACCACA AGCACTGGTG ACGCCGAGGG TCAGGTGCTG
GCGCAGTGCG CGGTCGATCC GGCCATGCTC ACGCCCGAGC GACTGTTGGC GGTACAGGCC
CAGTTCACCG GCCCCATCCG CCAGGTGCCG CCCATGCACA GCGCGCTCAA GAAAGACGGC
AAGGCGCTGT ACGAGTACGC GCGTGCCGGC ATCGCCGTGG AGCGCGAGGC GCGTGATGTC
ACGATTCATG CATTAAAACT GGCGCTAACG CATACGGAGC AAGCGCAACC AGCTATTAAA
ATAGTAGTGA CCTGCAGCAA GGGTACCTAC ATCCGTACCC TGGGTGAAGA CATCGGCCAG
GCGCTGGGCT GCGGCGCGCA TCTCACGTTC CTGCGCCGTA CCGACACGGG CGGTATCGGC
GTGGAGCGCT GCGTGACACT GGAGGCGCTG CAGGCCATGG ACGAGGATGC GCGCATGGCC
TGCGTGCACC CGGTGGAGAC CTTGCTGGCG CAGCACACGG CTGTCACGCT GGACGATGAC
AATGCCGGGC GTTTCCTCTC GGGCATGCGC CGGCGCGGCC CCTGGCCCGA CGCGCCCGCC
GTGGCCGTGT TCGGGGCGCG CCCGCGCGTG CTGCTGGGGG TCGGGCATGT GCGGGGAGGA
GAGCTGATTC CAGACCGGCT GCTCAGCCCC CTTGAAATTC AACAGATTCT GGAGAGCTCG
CCGCGGGCTG AACGCGGCAC ATTGGAAGCA ACTACGCTAT GA
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| Protein sequence | MTERAPRIRV QRRPVHGVLL LDKPLGLSSN DALQKVKWLL RAEKAGHTGT LDPLASGVLP
LCFGAATKFS QLQLEAPKAY EAVALLGTTT STGDAEGQVL AQCAVDPAML TPERLLAVQA
QFTGPIRQVP PMHSALKKDG KALYEYARAG IAVEREARDV TIHALKLALT HTEQAQPAIK
IVVTCSKGTY IRTLGEDIGQ ALGCGAHLTF LRRTDTGGIG VERCVTLEAL QAMDEDARMA
CVHPVETLLA QHTAVTLDDD NAGRFLSGMR RRGPWPDAPA VAVFGARPRV LLGVGHVRGG
ELIPDRLLSP LEIQQILESS PRAERGTLEA TTL
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